Factsheet for TraesCS6A01G225700.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0422500-01	Rice	cytosol, mitochondrion, nucleus	88.68	86.27
EER91601	Sorghum	nucleus	83.1	81.12
Zm00001d032935_P006	Maize	nucleus	83.28	80.88
TraesCS4A01G029300.1	Wheat	cytosol, mitochondrion, nucleus	81.01	79.76
GSMUA_Achr2P08860_001	Banana	cytosol	53.14	70.77
VIT_07s0151g00590.t01	Wine grape	nucleus	67.07	69.0
GSMUA_Achr3P14960_001	Banana	nucleus	63.41	68.81
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	59.76	67.79
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	65.85	66.67
GSMUA_Achr7P25790_001	Banana	nucleus	58.71	66.6
KRG95566	Soybean	nucleus	64.63	66.37
KRH67243	Soybean	nucleus	63.94	65.89
PGSC0003DMT400049726	Potato	nucleus	63.76	65.36
Solyc09g065480.1.1	Tomato	nucleus	63.41	65.0
KRH32041	Soybean	nucleus	63.24	64.94
KRH71395	Soybean	nucleus	61.85	63.39
KRH32792	Soybean	cytosol	28.92	62.64
TraesCS5A01G432000.1	Wheat	nucleus	61.5	62.48
AT3G63240.2	Thale cress	nucleus	59.41	62.34
KRG91335	Soybean	nucleus	62.72	62.28
TraesCS4A01G296200.1	Wheat	nucleus	60.98	62.06
KRH35494	Soybean	nucleus	62.72	61.33
KRH77819	Soybean	nucleus	61.67	61.14
KRH27671	Soybean	nucleus	60.98	60.45
CDY15360	Canola	nucleus	56.45	58.06
CDX76691	Canola	cytosol, mitochondrion, nucleus	56.62	57.93
Bra007737.1-P	Field mustard	mitochondrion	57.67	57.87
CDY56450	Canola	mitochondrion	56.62	57.83
CDY47282	Canola	nucleus	55.92	57.42
AT2G32010.3	Thale cress	nucleus	59.41	57.41
CDY10113	Canola	nucleus	55.75	57.35
Solyc09g082370.2.1	Tomato	nucleus	62.02	57.05
CDY15542	Canola	nucleus	54.36	56.93
PGSC0003DMT400082071	Potato	nucleus	61.85	56.89
CDX86576	Canola	nucleus	55.05	56.33
CDY60962	Canola	cytosol, golgi, nucleus	56.79	56.11
Bra021766.1-P	Field mustard	nucleus	56.1	55.81
PGSC0003DMT400042059	Potato	nucleus	57.14	55.03
Solyc06g054010.2.1	Tomato	nucleus	55.92	54.13
Bra015428.1-P	Field mustard	nucleus	54.7	53.86
AT1G05470.2	Thale cress	nucleus	57.32	53.32
Bra030611.1-P	Field mustard	nucleus	56.1	51.6
TraesCS4A01G189600.1	Wheat	plastid	39.9	40.89
TraesCS4A01G073900.1	Wheat	cytosol	32.75	40.43
TraesCS1A01G305800.2	Wheat	plastid	37.63	39.06
TraesCS6A01G302300.1	Wheat	nucleus, plastid	40.42	38.86
TraesCS3A01G338100.1	Wheat	nucleus, plastid	38.68	38.21
TraesCS1A01G039300.1	Wheat	plastid	39.2	37.88
TraesCS7A01G181500.1	Wheat	nucleus, plastid	32.4	37.58
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	28.4	36.63
TraesCS1A01G357300.2	Wheat	cytosol	35.54	32.18
TraesCS3A01G114900.1	Wheat	cytosol	31.88	31.18
TraesCS3A01G244500.1	Wheat	cytosol	36.41	31.1

Protein Annotations

EnsemblPlants:TraesCS6A01G225700.2	EnsemblPlantsGene:TraesCS6A01G225700	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF157	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:424797452..424800668

Molecular Weight (calculated)

65224.5 Da

IEP (calculated)

9.343

GRAVY (calculated)

-0.703

Length

574 amino acids

Sequence
(BLAST)

001: MGDGTKKSKL SWSNSKSLVR KWFNIRGKSH DFHADDAAAI GRRRGGGDSE WMSGSFSRRE SCTVKKSRTE RRSSHERSQR SKIDLDAAEA TVTLDYRIFV
101: ATWNLGGRAP PCSLGLHDWL HTSPPADIYV LGFQEIVPLN AGNVLGAEDN GPARKWVSLV RRTLNSMPGS GSGSGSATLH TPSPAPNVVV EMDDDFQGSS
201: RRDNPSLFHR RSFQAGRSRS LRMEGDILAP RLDRRYSVND RVMYGSRPSD YEANYHRWED ENNDGESPST VFSPMSYGYG NAPPYVEETN GTAAGHTRYC
301: LVASKQMVGL FLMVWARREI KSDIRNLKVS CVGRGLMGYL GNKGSISVSM LLHQTSFCFV CSHLTSGHKD GDEHRRNSDV MEILRKTRFP MVYGQYERSA
401: ETVLEHDRIV WLGDLNYRIA LSYRAVKALV EMRDWKALLE KDQLRSEQRG GRVFPGWNEG RIYFPPTYKY SNNSDKYAGE DMNQKEKKRT PAWCDRILWY
501: GRGLSQLSYV RGESRFSDHR PVYSMFSAEV ESINHSRIQK MSSSSSQLDI EELLPYSYGY TDINPYGYTD LNFY

Best Arabidopsis Sequence Match ( AT3G63240.1 )
(BLAST)

001: MGDGNLKKSK LSWPKTLVKK WLNIKSKSED FHADDLDRGE GGGDWRNNVI EREEACSVRK SKTETRSKRN SGRARRNKLD VDPPLDHLRV FTATWNVAGK
101: SPPSYLNLDD WLHTSPPSDI YVLGFQEIVP LNAGNVLGTE DNGPARKWVS LIRRTLNSLP GGSCQTPSPV PHPVAELDSD FEGDSAAGAN SLFYHRSRSM
201: RMDASASSLP QQFDRRFSVC DRFMLGDTPD DFYDQSFRYC SSEDEPADSP CHDHYSPVSR TGSFVADDRD KGRDKSKYCL VASKQMVGIF LTVWVKSDLR
301: DSVNNLKVSC VGRGLMGYLG NKGSISISMS VHQTSFCFVC SHLTSGQKEG DELRRNSDVL EILRKTRFPR VNNAGDDKSP QMISEHDRVI WLGDLNYRIA
401: LSYRSAKALV EMRDWRALLE KDQLRIEQRK GCVFEGWKEG TIYFPPTYKY SNNSDIYAGD DRLPKAKRRT PAWCDRILWH GSGISQLSYV RGESRFSDHR
501: PVYSLFSVEI ESAYRNRIKK SSSYTSSRIE VEELLPQRYG YSELNPY

Arabidopsis Description

IP5P4Type I inositol polyphosphate 5-phosphatase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.