CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032935_P006	Maize	nucleus	94.56	94.08
Os10t0422500-01	Rice	cytosol, mitochondrion, nucleus	84.01	83.73
TraesCS6A01G225700.2	Wheat	nucleus	81.12	83.1
EER92819	Sorghum	cytosol, mitochondrion, nucleus	77.72	78.93
GSMUA_Achr2P08860_001	Banana	cytosol	53.74	73.32
GSMUA_Achr3P14960_001	Banana	nucleus	63.61	70.7
VIT_07s0151g00590.t01	Wine grape	nucleus	66.67	70.25
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	60.03	69.76
GSMUA_Achr7P25790_001	Banana	nucleus	58.33	67.79
KRG95566	Soybean	nucleus	64.12	67.44
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	64.97	67.37
KRH67243	Soybean	nucleus	63.61	67.15
EER93309	Sorghum	nucleus	64.12	66.84
KRH32041	Soybean	nucleus	63.44	66.73
PGSC0003DMT400049726	Potato	nucleus	63.44	66.61
Solyc09g065480.1.1	Tomato	nucleus	63.1	66.25
KRH71395	Soybean	nucleus	62.59	65.71
KRH32792	Soybean	cytosol	29.42	65.28
KXG37885	Sorghum	nucleus	61.56	65.11
EER98050	Sorghum	cytosol	62.93	65.03
AT3G63240.2	Thale cress	nucleus	59.18	63.62
KRG91335	Soybean	nucleus	61.9	62.98
KRH77819	Soybean	nucleus	61.56	62.52
KRH35494	Soybean	nucleus	62.07	62.18
KRH27671	Soybean	nucleus	61.05	62.0
Bra007737.1-P	Field mustard	mitochondrion	57.99	59.62
CDY56450	Canola	mitochondrion	56.97	59.61
CDX76691	Canola	cytosol, mitochondrion, nucleus	56.63	59.36
CDY15360	Canola	nucleus	55.78	58.78
CDY47282	Canola	nucleus	55.78	58.68
CDY10113	Canola	nucleus	55.44	58.42
CDY15542	Canola	nucleus	54.25	58.21
CDX86576	Canola	nucleus	54.76	57.4
Solyc09g082370.2.1	Tomato	nucleus	60.71	57.21
PGSC0003DMT400082071	Potato	nucleus	60.37	56.89
Bra021766.1-P	Field mustard	nucleus	55.61	56.67
CDY60962	Canola	cytosol, golgi, nucleus	55.95	56.63
AT2G32010.3	Thale cress	nucleus	57.14	56.57
PGSC0003DMT400042059	Potato	nucleus	56.8	56.04
Solyc06g054010.2.1	Tomato	nucleus	55.78	55.31
Bra015428.1-P	Field mustard	nucleus	54.59	55.06
AT1G05470.2	Thale cress	nucleus	56.63	53.97
Bra030611.1-P	Field mustard	nucleus	55.44	52.24
EES18903	Sorghum	nucleus	39.29	42.54
EES15005	Sorghum	cytosol	28.91	41.56
EES18414	Sorghum	nucleus, plastid	38.27	41.51
OQU87743	Sorghum	plastid	38.61	41.2
KXG19625	Sorghum	nucleus	35.54	40.9
OQU89459	Sorghum	cytosol	29.76	40.89
EES15004	Sorghum	mitochondrion	27.55	40.6
KXG27642	Sorghum	plastid	38.61	40.04
KXG22413	Sorghum	peroxisome	29.59	39.37
KXG30738	Sorghum	nucleus	37.41	38.06
KXG39809	Sorghum	nucleus	31.97	37.83
KXG22411	Sorghum	mitochondrion	34.01	33.5
EES01371	Sorghum	plastid	35.03	31.64
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.18	31.41

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EntrezGene:8064897	UniProt:C5X1I0	EnsemblPlants:EER91601	ProteinID:EER91601
ProteinID:EER91601.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc
InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF157	SMART:SM00128	EnsemblPlantsGene:SORBI_3001G244900
SUPFAM:SSF56219	UniParc:UPI0001A81FDE	RefSeq:XP_002464603.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:25581771..25586661

Molecular Weight (calculated)

66174.7 Da

IEP (calculated)

9.201

GRAVY (calculated)

-0.682

Length

588 amino acids

Sequence
(BLAST)

001: MRDGGGNSKM SKLSWSKSLV RKWFNIRGKS HDFHADAAAV GTGSGRSGGG DDDWRDGSFT RRDSYAAKKS RTERASRRSH ERSRRSKIDL DAAEATVMLD
101: YRIFAATWNV GGRAPPGSLS LDDWLRTSPP ADIYVLGFQE IVPLNAGNVL GAEDNGPARK WVSLVRRTLN SLPGSGGSGS LQTPSPAPYL VAEMDADFER
201: STRNDPSFFH RRSFQSGLSR SMRVDGDILA GPGPARLERR YSVNDRVMYG SRPSDYEANC RWGGGGGGQS DDEDDHVGGG ESPITVFSPM SHGYGNAQPM
301: EECSGSARGP ARYCLVASKQ MVGLFLMIWA RKEMKNDIRN LKVSCVGRGL MGYLGNKGSI SISMVLHQTS FCFVCSHLTS GQKDGDEHRR NSDVMEILRK
401: TRFPRVCGQY ERSPETILEH DRIIWLGDLN YRIALSYRSV KALVEMRNWK ALLEKDQLTR EQRGGRVFAG WNEGRIYFPP TYKYSNNSDK YAGDDMNQKE
501: KKRTPAWCDR ILWYGRGLSQ LSYVRGESRF SDHRPVYSMF IAEVESINHT QIQKMSSWSS QLDIEELLPY SYGYTEIDHY GYTDLNFY

Best Arabidopsis Sequence Match ( AT3G63240.1 )
(BLAST)

001: MGDGNLKKSK LSWPKTLVKK WLNIKSKSED FHADDLDRGE GGGDWRNNVI EREEACSVRK SKTETRSKRN SGRARRNKLD VDPPLDHLRV FTATWNVAGK
101: SPPSYLNLDD WLHTSPPSDI YVLGFQEIVP LNAGNVLGTE DNGPARKWVS LIRRTLNSLP GGSCQTPSPV PHPVAELDSD FEGDSAAGAN SLFYHRSRSM
201: RMDASASSLP QQFDRRFSVC DRFMLGDTPD DFYDQSFRYC SSEDEPADSP CHDHYSPVSR TGSFVADDRD KGRDKSKYCL VASKQMVGIF LTVWVKSDLR
301: DSVNNLKVSC VGRGLMGYLG NKGSISISMS VHQTSFCFVC SHLTSGQKEG DELRRNSDVL EILRKTRFPR VNNAGDDKSP QMISEHDRVI WLGDLNYRIA
401: LSYRSAKALV EMRDWRALLE KDQLRIEQRK GCVFEGWKEG TIYFPPTYKY SNNSDIYAGD DRLPKAKRRT PAWCDRILWH GSGISQLSYV RGESRFSDHR
501: PVYSLFSVEI ESAYRNRIKK SSSYTSSRIE VEELLPQRYG YSELNPY

Arabidopsis Description

IP5P4Type I inositol polyphosphate 5-phosphatase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.