Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15542 | Canola | nucleus | 85.09 | 95.8 |
| CDX86576 | Canola | nucleus | 86.06 | 94.65 |
| CDY10113 | Canola | nucleus | 84.77 | 93.73 |
| Bra015428.1-P | Field mustard | nucleus | 88.49 | 93.65 |
| CDY47282 | Canola | nucleus | 84.6 | 93.38 |
| Bra030611.1-P | Field mustard | nucleus | 92.38 | 91.35 |
| AT2G32010.3 | Thale cress | nucleus | 83.95 | 87.21 |
| KRH32792 | Soybean | cytosol | 34.04 | 79.25 |
| VIT_05s0020g03770.t01 | Wine grape | cytosol, mitochondrion, nucleus | 71.64 | 77.95 |
| KRH35494 | Soybean | nucleus | 73.74 | 77.51 |
| KRG91335 | Soybean | nucleus | 72.61 | 77.51 |
| KRH77819 | Soybean | nucleus | 71.96 | 76.68 |
| KRH27671 | Soybean | nucleus | 71.64 | 76.34 |
| VIT_07s0151g00590.t01 | Wine grape | nucleus | 64.99 | 71.86 |
| PGSC0003DMT400082071 | Potato | nucleus | 71.96 | 71.15 |
| Solyc09g082370.2.1 | Tomato | nucleus | 71.96 | 71.15 |
| PGSC0003DMT400042059 | Potato | nucleus | 66.45 | 68.79 |
| Solyc06g054010.2.1 | Tomato | nucleus | 65.15 | 67.79 |
| KRH32041 | Soybean | nucleus | 61.26 | 67.62 |
| KRH71395 | Soybean | nucleus | 60.78 | 66.96 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 52.67 | 66.6 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 53.32 | 66.46 |
| Solyc09g065480.1.1 | Tomato | nucleus | 59.81 | 65.89 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 50.57 | 65.82 |
| PGSC0003DMT400049726 | Potato | nucleus | 59.64 | 65.71 |
| GSMUA_Achr2P08860_001 | Banana | cytosol | 45.87 | 65.66 |
| KRG95566 | Soybean | nucleus | 59.48 | 65.65 |
| KRH67243 | Soybean | nucleus | 59.16 | 65.53 |
| GSMUA_Achr8P26780_001 | Banana | endoplasmic reticulum | 51.38 | 62.65 |
| GSMUA_Achr3P14960_001 | Banana | nucleus | 53.65 | 62.57 |
| Os03t0793600-00 | Rice | nucleus | 57.05 | 62.3 |
| AT3G63240.2 | Thale cress | nucleus | 55.11 | 62.16 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 51.7 | 62.06 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 50.89 | 62.06 |
| Os07t0175900-01 | Rice | cytosol | 57.05 | 61.75 |
| EER98050 | Sorghum | cytosol | 56.73 | 61.51 |
| EER93309 | Sorghum | nucleus | 55.75 | 60.99 |
| EER92819 | Sorghum | cytosol, mitochondrion, nucleus | 57.21 | 60.97 |
| Os03t0160600-01 | Rice | mitochondrion | 56.89 | 60.94 |
| GSMUA_Achr7P25790_001 | Banana | nucleus | 49.76 | 60.67 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 55.43 | 60.64 |
| Zm00001d048434_P001 | Maize | mitochondrion | 57.05 | 60.59 |
| KXG37885 | Sorghum | nucleus | 54.46 | 60.43 |
| TraesCS4D01G015900.2 | Wheat | nucleus | 55.11 | 60.28 |
| TraesCS5B01G434000.1 | Wheat | nucleus | 55.11 | 60.18 |
| Zm00001d013090_P002 | Maize | nucleus | 55.27 | 60.14 |
| Zm00001d033451_P004 | Maize | nucleus | 54.46 | 60.11 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 54.94 | 60.0 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 54.94 | 60.0 |
| TraesCS4B01G017400.1 | Wheat | nucleus | 54.78 | 59.93 |
| TraesCS4D01G275200.1 | Wheat | nucleus | 56.24 | 59.72 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 54.62 | 59.54 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 56.24 | 59.52 |
| TraesCS4B01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 56.24 | 59.42 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 55.92 | 59.28 |
| Zm00001d013603_P006 | Maize | nucleus | 54.3 | 58.77 |
| Zm00001d034410_P001 | Maize | plastid | 54.78 | 58.48 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 55.92 | 58.47 |
| Zm00001d018929_P002 | Maize | cytosol | 56.24 | 57.45 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 53.32 | 57.32 |
| HORVU5Hr1G104620.10 | Barley | nucleus | 55.59 | 57.26 |
| EER91601 | Sorghum | nucleus | 53.97 | 56.63 |
| Zm00001d032935_P006 | Maize | nucleus | 53.81 | 56.18 |
| Os03t0663700-01 | Rice | nucleus | 22.85 | 48.45 |
| AT2G37440.1 | Thale cress | mitochondrion | 37.6 | 48.43 |
| AT5G04980.2 | Thale cress | nucleus | 34.04 | 45.06 |
| AT2G01900.3 | Thale cress | mitochondrion | 29.01 | 42.12 |
| AT5G65090.1 | Thale cress | nucleus | 35.01 | 40.83 |
| AT1G34120.2 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 32.74 | 34.24 |
| AT1G71710.1 | Thale cress | cytosol, nucleus, plastid | 34.52 | 32.08 |
| AT4G18010.1 | Thale cress | nucleus | 33.23 | 31.73 |
Protein Annotations
| MapMan:27.5.4.1 | Gene3D:3.60.10.10 | EntrezGene:837048 | UniProt:A0A178WIE4 | ProteinID:AAF79735.1 | ProteinID:AEE27844.1 |
| ProteinID:ANM59756.1 | ArrayExpress:AT1G05470 | EnsemblPlantsGene:AT1G05470 | RefSeq:AT1G05470 | TAIR:AT1G05470 | RefSeq:AT1G05470-TAIR-G |
| EnsemblPlants:AT1G05470.2 | EMBL:BX816898 | Symbol:CVP2 | InterPro:Endo/exonu/phosph_ase_sf | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004439 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006629 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0009738 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010051 | GO:GO:0010067 |
| GO:GO:0010305 | GO:GO:0010588 | GO:GO:0016787 | GO:GO:0030154 | GO:GO:0032957 | GO:GO:0034485 |
| GO:GO:0046030 | GO:GO:0046855 | GO:GO:0046856 | GO:GO:0048016 | InterPro:IPPc | InterPro:IPR036691 |
| RefSeq:NP_001322092.1 | RefSeq:NP_172038.4 | ProteinID:OAP18117.1 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF174 | UniProt:Q9LR47 |
| SMART:SM00128 | SUPFAM:SSF56219 | UniParc:UPI0001A7B18C | SEG:seg | : | : |
Description
IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
Coordinates
chr1:-:1607227..1611815
Molecular Weight (calculated)
70856.5 Da
IEP (calculated)
9.707
GRAVY (calculated)
-0.871
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.