Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005195.1-P Field mustard nucleus 74.95 88.21
CDX91363 Canola mitochondrion 87.68 87.87
CDX74960 Canola mitochondrion 91.02 87.37
CDY18445 Canola mitochondrion 87.27 84.27
CDX79733 Canola nucleus 77.24 84.09
CDY07789 Canola mitochondrion 80.17 83.12
Bra017187.1-P Field mustard mitochondrion 85.8 83.03
Bra000001.1-P Field mustard mitochondrion 87.27 82.94
CDX93379 Canola mitochondrion 85.59 82.66
KRG95832 Soybean nucleus 58.87 60.0
KRH32331 Soybean mitochondrion 57.83 59.83
KRH19738 Soybean nucleus 58.25 59.74
PGSC0003DMT400061482 Potato nucleus 56.37 58.06
KRH67562 Soybean nucleus 59.08 57.4
Solyc09g005690.2.1 Tomato cytosol 49.48 56.03
VIT_08s0040g02520.t01 Wine grape cytosol 55.95 55.37
Os05t0114100-00 Rice cytosol, nucleus 44.68 49.31
GSMUA_Achr5P28560_001 Banana nucleus 55.53 48.72
AT3G63240.2 Thale cress nucleus 49.9 43.69
EES18903 Sorghum nucleus 48.85 43.09
GSMUA_Achr8P02080_001 Banana mitochondrion 50.52 42.83
GSMUA_Achr6P15360_001 Banana nucleus 53.44 42.67
TraesCSU01G006000.2 Wheat plastid 50.73 42.33
Zm00001d035612_P001 Maize mitochondrion 45.93 41.9
AT5G04980.2 Thale cress nucleus 40.71 41.85
AT2G01900.3 Thale cress mitochondrion 36.74 41.41
TraesCS1B01G052100.1 Wheat plastid 50.94 41.36
Zm00001d035614_P001 Maize mitochondrion 45.09 41.3
TraesCS1A01G039300.1 Wheat plastid 51.15 41.25
AT2G32010.3 Thale cress nucleus 49.9 40.24
AT1G05470.2 Thale cress nucleus 48.43 37.6
AT5G65090.1 Thale cress nucleus 40.92 37.05
AT1G34120.2 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 37.79 30.68
AT4G18010.1 Thale cress nucleus 39.25 29.1
AT1G71710.1 Thale cress cytosol, nucleus, plastid 38.41 27.71
Protein Annotations
MapMan:27.5.4.1EntrezGene:818321UniProt:A0A178VVC7ProteinID:AAC98062.1ProteinID:AEC09399.1EMBL:AK227745
ProteinID:ANM61598.1ArrayExpress:AT2G37440EnsemblPlantsGene:AT2G37440RefSeq:AT2G37440TAIR:AT2G37440RefSeq:AT2G37440-TAIR-G
EnsemblPlants:AT2G37440.1TAIR:AT2G37440.1Unigene:At.37422InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphataseGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0046856InterPro:IPPcInterPro:IPR036691RefSeq:NP_001323804.1RefSeq:NP_181280.3ProteinID:OAP09766.1
PFAM:PF03372PO:PO:0000084PO:PO:0000256PO:PO:0000262PO:PO:0009005PANTHER:PTHR11200
PANTHER:PTHR11200:SF115UniProt:Q0WT19SMART:SM00128SUPFAM:SSF56219UniParc:UPI000034EE25:
Description
IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
Coordinates
chr2:+:15718044..15722152
Molecular Weight (calculated)
54624.0 Da
IEP (calculated)
9.568
GRAVY (calculated)
-0.652
Length
479 amino acids
Sequence
(BLAST)
001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.