CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74960	Canola	mitochondrion	98.74	94.59
Bra005195.1-P	Field mustard	nucleus	79.29	93.12
AT2G37440.1	Thale cress	mitochondrion	87.87	87.68
CDY18445	Canola	mitochondrion	90.8	87.5
CDY07789	Canola	mitochondrion	83.68	86.58
CDX93379	Canola	mitochondrion	89.33	86.09
CDX79733	Canola	nucleus	76.99	83.64
KRG95832	Soybean	nucleus	59.0	60.0
KRH32331	Soybean	mitochondrion	57.95	59.83
KRH19738	Soybean	nucleus	58.37	59.74
KRH67562	Soybean	nucleus	59.62	57.81
PGSC0003DMT400061482	Potato	nucleus	55.86	57.42
CDY70508	Canola	cytosol	39.96	56.68
VIT_08s0040g02520.t01	Wine grape	cytosol	56.9	56.2
Solyc09g005690.2.1	Tomato	cytosol	48.54	54.85
Os05t0114100-00	Rice	cytosol, nucleus	45.82	50.46
GSMUA_Achr5P28560_001	Banana	nucleus	53.97	47.25
TraesCSU01G006000.2	Wheat	plastid	51.67	43.03
GSMUA_Achr8P02080_001	Banana	mitochondrion	50.63	42.83
EES18903	Sorghum	nucleus	48.12	42.36
CDX76691	Canola	cytosol, mitochondrion, nucleus	49.58	42.25
GSMUA_Achr6P15360_001	Banana	nucleus	52.93	42.17
CDY33984	Canola	nucleus	41.63	42.07
CDY56450	Canola	mitochondrion	49.37	41.99
CDY15360	Canola	nucleus	48.95	41.94
TraesCS1B01G052100.1	Wheat	plastid	51.67	41.86
TraesCS1A01G039300.1	Wheat	plastid	51.88	41.75
CDY14134	Canola	plastid	41.21	41.65
CDY04934	Canola	nucleus	41.21	41.65
CDY15542	Canola	nucleus	47.28	41.24
CDX80935	Canola	nucleus	40.59	41.1
Zm00001d035612_P001	Maize	mitochondrion	44.77	40.76
CDY10113	Canola	nucleus	47.28	40.5
CDX86576	Canola	nucleus	47.49	40.46
CDY60962	Canola	cytosol, golgi, nucleus	49.16	40.45
CDY47282	Canola	nucleus	47.07	40.25
Zm00001d035614_P001	Maize	mitochondrion	43.93	40.15
CDY09402	Canola	mitochondrion	35.77	39.86
CDY15795	Canola	mitochondrion	35.36	39.39
CDY53817	Canola	nucleus	25.52	37.42
CDY31285	Canola	nucleus	42.26	36.59
CDX78819	Canola	nucleus	26.99	35.83
CDY08822	Canola	nucleus	42.47	35.06
CDY14538	Canola	nucleus	42.47	35.0
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	37.24	33.09
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	37.66	33.03
CDY53820	Canola	mitochondrion	20.08	32.99
CDY05076	Canola	mitochondrion	38.49	32.0
CDX90734	Canola	mitochondrion	38.49	31.72
CDX90428	Canola	nucleus	41.0	30.62
CDY44496	Canola	nucleus	39.75	30.4
CDX72820	Canola	cytosol, nucleus, plastid	39.75	29.83
CDX68304	Canola	cytosol, nucleus, plastid	39.33	29.56
CDX96338	Canola	plastid	39.96	29.34
CDY68359	Canola	nucleus	30.54	27.55
CDY37949	Canola	cytosol, nucleus, plastid	35.56	27.51
CDY03700	Canola	cytosol, nucleus, plastid	35.56	26.32
CDY53816	Canola	cytosol	13.18	26.03

Protein Annotations

EnsemblPlants:CDX91363	EnsemblPlantsGene:GSBRNA2T00152655001	Gene3D:3.60.10.10	GO:A0A078DVV7	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc
InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	PFAM:PF03372	ProteinID:CDX91363	ProteinID:CDX91363.1
SEG:seg	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0004EDE5F5	MapMan:27.5.4.1	:

Description

BnaC04g07870D

Coordinates

chrLK031867:+:265397..269254

Molecular Weight (calculated)

54585.9 Da

IEP (calculated)

9.650

GRAVY (calculated)

-0.661

Length

478 amino acids

Sequence
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGKME PTQSRRKSCS DGDYYKIMPA KFPGLLGQGN GDLKQSTGEQ HVTRVDDKLD LKMFVGTWNV
101: GGKSPHDGLD LKDWLQSPAD ADIYVLGFQE IVPLNAGNVL GAEDNGPVAK WLSLIREALN NNNHNLSQND LQLSKNYRTS FELTKSSQQP RYSLAASKQM
201: VGIFLCVWVR DDLRKHITNL KVSCVGRGIM GYLGNKGSIS ISMSVHATSL CFVCTHLTSG EKEGDEVRRN LDVTEILKRT RFSRSSKDSR PETIMDHDKV
301: IWLGDLNYRL RASSDVHEQL NNNDWEALLE KDQLKIEQRA GRVFQGWEEG RIYFAPTYKY LINSDNYVAQ TEKSKEKRRT PAWCDRILWK GDGMKQIWYT
401: RGESRFSDHR PVQSLFSVHI DLTLNQSYRK TKPNNQNHRP NPVLPYTCHG KVQAEEILLL TRAQSCIDTQ PRLISSVS

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.