CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53817	Canola	nucleus	50.47	98.47
CDY53820	Canola	mitochondrion	44.65	97.59
CDY53816	Canola	cytosol	36.79	96.69
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	98.74	94.86
CDY37949	Canola	cytosol, nucleus, plastid	79.09	81.39
CDY03700	Canola	cytosol, nucleus, plastid	80.97	79.72
CDX96338	Canola	plastid	81.29	79.42
CDX72820	Canola	cytosol, nucleus, plastid	79.25	79.12
KRH35060	Soybean	cytosol, mitochondrion, nucleus, plastid	54.72	55.15
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	54.56	54.99
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	55.19	54.93
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	55.19	54.76
PGSC0003DMT400064482	Potato	cytosol, mitochondrion, nucleus, plastid	54.72	52.17
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	42.61	52.12
VIT_18s0157g00210.t01	Wine grape	plastid	57.55	51.62
CDX90734	Canola	mitochondrion	47.01	51.55
CDY05076	Canola	mitochondrion	46.38	51.3
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	43.55	50.83
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	42.92	50.74
GSMUA_AchrUn_...	Banana	nucleus	45.44	49.83
GSMUA_Achr7P13350_001	Banana	mitochondrion	41.67	48.36
KXG22413	Sorghum	peroxisome	33.49	48.19
CDY70508	Canola	cytosol	25.47	48.07
Zm00001d038831_P001	Maize	mitochondrion, nucleus	31.13	48.06
Os01t0183300-01	Rice	cytosol	45.28	47.14
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	46.86	46.56
TraesCS3A01G114900.1	Wheat	cytosol	42.92	46.51
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	42.3	46.14
TraesCS3B01G275500.1	Wheat	cytosol	46.38	43.96
EES01371	Sorghum	plastid	44.97	43.93
KXG22411	Sorghum	mitochondrion	41.2	43.89
TraesCS3D01G246900.1	Wheat	cytosol	46.38	43.83
TraesCS3A01G244500.1	Wheat	cytosol	46.23	43.75
GSMUA_Achr10P...	Banana	cytosol	45.91	43.58
Os01t0716800-01	Rice	plastid	45.75	43.05
TraesCS3D01G117300.2	Wheat	mitochondrion	43.08	42.55
HORVU3Hr1G020880.11	Barley	cytosol	41.98	42.25
Zm00001d039582_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	45.6	41.97
HORVU3Hr1G067840.2	Barley	cytosol	47.01	41.88
TraesCS1A01G357300.2	Wheat	cytosol	40.88	41.01
Zm00001d038830_P002	Maize	plastid	37.26	40.51
TraesCS1D01G361500.2	Wheat	cytosol	40.25	40.51
Zm00001d043653_P004	Maize	plastid	45.28	40.39
TraesCS1B01G373800.3	Wheat	cytosol	42.45	40.3
CDX79733	Canola	nucleus	27.67	40.0
CDY15795	Canola	mitochondrion	26.89	39.86
CDY09402	Canola	mitochondrion	26.57	39.39
CDX91363	Canola	mitochondrion	29.56	39.33
CDX78819	Canola	nucleus	22.01	38.89
HORVU1Hr1G080460.7	Barley	cytosol, golgi, mitochondrion, plastid	41.51	38.71
CDY15360	Canola	nucleus	33.33	37.99
CDX74960	Canola	mitochondrion	29.4	37.47
CDY15542	Canola	nucleus	32.23	37.41
CDY10113	Canola	nucleus	32.7	37.28
CDY47282	Canola	nucleus	32.7	37.21
CDY07789	Canola	mitochondrion	26.89	37.01
CDY18445	Canola	mitochondrion	28.77	36.9
CDY33984	Canola	nucleus	27.36	36.79
CDX86576	Canola	nucleus	32.23	36.54
CDY60962	Canola	cytosol, golgi, nucleus	33.33	36.49
CDX80935	Canola	nucleus	27.04	36.44
CDX93379	Canola	mitochondrion	28.3	36.29
CDX76691	Canola	cytosol, mitochondrion, nucleus	31.76	36.01
CDY56450	Canola	mitochondrion	31.76	35.94
CDY14134	Canola	plastid	26.57	35.73
CDY04934	Canola	nucleus	26.57	35.73
Os05t0535600-00	Rice	cytosol, mitochondrion	20.13	34.97
CDY44496	Canola	nucleus	33.96	34.56
CDX90428	Canola	nucleus	33.96	33.75
KRH04678	Soybean	cytosol	17.3	32.26
CDY31285	Canola	nucleus	27.99	32.25
CDY68359	Canola	nucleus	25.63	30.75
CDY08822	Canola	nucleus	27.67	30.4
CDY14538	Canola	nucleus	27.67	30.34

Protein Annotations

EnsemblPlants:CDX68304	EnsemblPlantsGene:GSBRNA2T00099594001	Gene3D:3.60.10.10	GO:A0A078BWZ3	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc
InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF128	PFAM:PF03372	ProteinID:CDX68304	ProteinID:CDX68304.1
SEG:seg	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0004EE02D4	MapMan:27.5.4.1	:

Description

BnaA07g23440D

Coordinates

chrLK031787:+:4927786..4931260

Molecular Weight (calculated)

71937.5 Da

IEP (calculated)

7.869

GRAVY (calculated)

-0.512

Length

636 amino acids

Sequence
(BLAST)

001: MSSVAEPAGM MRKSFRRQKS QRLWAKVVMR KWLNISARDL EYGADTEDES ENEDVVEENQ DSSSDEDNEE SSTRRRGSTQ SWVSEISEDP ITVAEAAAEF
101: TSNDAPLKLR RRNSETLRAQ YINNKEIRVC VGTWNVGGVS PPSDLDIDDW IDINHSADIY VLGLQEVVPL NAGNILGAED NRPVAKWEEV IREALNRVRP
201: KNSGVKSYSD PPTPGIFKPF DETHDVIEEE LKHDGGVVGE VNTLVDPNSG VPVVEIKRQF SSPKKLDRQI CLRVDSFDKR KNDEDSPGTG MKTLNRMLSG
301: KERIGLSWPE PPLSMLGPSC VLDRQPSMKS TASLKTTKSF KAYNSFKYVA GSNIGVAPEV LALASMDLTS LMERKRRPAY VRLVSKQMVG ILLTIWVKRS
401: MRKHIQNVRV STVGVGIMGY IGNKGAVSVS MSIYQTFFCF ICTHLTAGER EVDQIKRNAD VHEIHKRTVF HSVSALGLPK LIYDHERIIW LGDLNYRLNL
501: SYEKTKDLIS KKDWSKLLEY DQLVKEYKKG RAFDGWSEGT LQFAPTYKYQ AHLDEYTGSD GKATRRTPAW CDRILSYGKG MRLVQYRRTE NKFSDHRPVV
601: AIYMAEVEVF SARKLQRALT FTDAEIEDEG LVAVVV

Best Arabidopsis Sequence Match ( AT1G71710.1 )
(BLAST)

001: MSPVEPAGIM KKSHRQKSQR LWAKLVMRKW LNISGRDPEY GADTDNESEN EDAREDNDDS SSDEEGGSGS RGRESKVYEN AEDAIAAASA VVDAAAAAAE
101: FISNDAPMKL RRRNSETLRA QYINNKEIRV CVGTWNVGGI SPPSDLDIDD WIEINQPADI YVLGLQEIVP LNAGNILGAE DDRPVAKWEE VIREALNRVR
201: PKLSGVKSYS DPPSPGRFKP FEETHDIIEE EVAFESDSDA GVEIHPIDEE EEEETDRLWA LKHDGGVIGE VKTLVDPNTG LPVVEIKRQF SIPKKLDRQL
301: CLRADSFKGI SDDDSTQTGM KTINRMLSGK ERIGLSWPEP PLNMLGPCVL DRQPSIKTVK SLKTAKSFKA YSSFKSVAGN NNGIPPEVLA LAEMDLKLLM
401: ERKRRPAYVR LVSKQMVGIL LTIWVKRSLR KHIQNVRVST VGVGVMGYIG NKGAVSVSMS INQTFFCFIN THLTAGEREV DQIKRNADVH EIHKRTVFHS
501: VSALGLPKLI YDHERIIWLG DLNYRLSSSY EKTRDLISKR EWSKLLEYDQ LVKEYRKGRA FDGWSEGTLH FPPTYKYQAN SDEYTANDGK APKRTPAWCD
601: RVLSYGKGMR LVHYRRTEQK FSDHRPVTAI YMAEVEVFSA RKLQRALTFT DAEIEDEGLV AVLV

Arabidopsis Description

IP5P3Type IV inositol polyphosphate 5-phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Z6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.