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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, plastid, cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • golgi 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, mitochondrion, plastid
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034444.1-P Field mustard cytosol, golgi, mitochondrion, plastid 100.0 100.0
CDX73292 Canola cytosol, endoplasmic reticulum, mitochondrion, nucleus 92.11 93.31
AT1G34120.2 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 82.2 75.93
CDX90734 Canola mitochondrion 66.79 62.76
CDY05076 Canola mitochondrion 66.06 62.61
CDY53817 Canola nucleus 33.58 56.13
CDY53820 Canola mitochondrion 27.34 51.2
GSMUA_Achr4P08910_001 Banana endoplasmic reticulum 48.26 50.58
KXG22413 Sorghum peroxisome 40.0 49.32
GSMUA_AchrUn_... Banana nucleus 49.91 46.9
GSMUA_Achr7P13350_001 Banana mitochondrion 46.97 46.72
CDY70508 Canola cytosol 28.62 46.29
Zm00001d038831_P001 Maize mitochondrion, nucleus 34.13 45.15
KXG22411 Sorghum mitochondrion 48.07 43.89
TraesCS3A01G114900.1 Wheat cytosol 47.16 43.78
CDX68304 Canola cytosol, nucleus, plastid 50.83 43.55
TraesCS3B01G134300.1 Wheat cytosol, nucleus, plastid 46.42 43.4
Os01t0183300-01 Rice cytosol 48.44 43.21
CDX72820 Canola cytosol, nucleus, plastid 50.46 43.17
EES01371 Sorghum plastid 51.19 42.86
CDY37949 Canola cytosol, nucleus, plastid 48.44 42.72
CDX96338 Canola plastid 51.01 42.7
EES00172 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 49.36 42.03
Zm00001d038830_P002 Maize plastid 44.95 41.88
TraesCS3B01G275500.1 Wheat cytosol 51.56 41.88
Os01t0716800-01 Rice plastid 51.74 41.72
TraesCS3D01G246900.1 Wheat cytosol 51.38 41.6
TraesCS3A01G244500.1 Wheat cytosol 51.01 41.37
CDY03700 Canola cytosol, nucleus, plastid 48.99 41.33
TraesCS1A01G357300.2 Wheat cytosol 48.07 41.32
TraesCS1D01G361500.2 Wheat cytosol 47.71 41.14
CDX78819 Canola nucleus 26.97 40.83
CDY15795 Canola mitochondrion 32.11 40.79
TraesCS1B01G373800.3 Wheat cytosol 49.91 40.6
CDY09402 Canola mitochondrion 31.93 40.56
GSMUA_Achr10P... Banana cytosol 49.54 40.3
TraesCS3D01G117300.2 Wheat mitochondrion 47.34 40.06
HORVU3Hr1G020880.11 Barley cytosol 45.87 39.56
HORVU1Hr1G080460.7 Barley cytosol, golgi, mitochondrion, plastid 49.36 39.44
Zm00001d043653_P004 Maize plastid 51.38 39.27
HORVU3Hr1G067840.2 Barley cytosol 51.19 39.08
CDX79733 Canola nucleus 31.38 38.86
CDY53816 Canola cytosol 16.88 38.02
Zm00001d039582_P002 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 48.07 37.92
CDY15542 Canola nucleus 37.98 37.77
CDX91363 Canola mitochondrion 33.03 37.66
CDY15360 Canola nucleus 37.98 37.1
CDY10113 Canola nucleus 37.98 37.1
CDY47282 Canola nucleus 37.98 37.03
CDX86576 Canola nucleus 37.8 36.72
CDY07789 Canola mitochondrion 31.01 36.58
CDX74960 Canola mitochondrion 33.39 36.47
CDY18445 Canola mitochondrion 32.84 36.09
CDX93379 Canola mitochondrion 32.84 36.09
CDY60962 Canola cytosol, golgi, nucleus 37.98 35.63
CDX80935 Canola nucleus 30.46 35.17
CDX76691 Canola cytosol, mitochondrion, nucleus 36.15 35.12
CDY56450 Canola mitochondrion 36.15 35.05
CDY14134 Canola plastid 30.28 34.88
CDY04934 Canola nucleus 30.28 34.88
CDY44496 Canola nucleus 39.82 34.72
CDX90428 Canola nucleus 40.55 34.53
Os05t0535600-00 Rice cytosol, mitochondrion 23.12 34.43
CDY33984 Canola nucleus 29.54 34.04
CDY68359 Canola nucleus 31.01 31.89
CDY31285 Canola nucleus 30.64 30.25
CDY08822 Canola nucleus 31.38 29.53
CDY14538 Canola nucleus 31.19 29.31
Protein Annotations
MapMan:27.5.4.1Gene3D:3.60.10.10GO:A0A078GTD7UniProt:A0A078GTD7EnsemblPlants:CDY28392ProteinID:CDY28392
ProteinID:CDY28392.1InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphataseGO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0046856EnsemblPlantsGene:GSBRNA2T00040220001
InterPro:IPPcInterPro:IPR036691PFAM:PF03372PFscan:PS51257PANTHER:PTHR11200PANTHER:PTHR11200:SF128
SMART:SM00128SUPFAM:SSF56219UniParc:UPI000254804BSEG:seg::
Description
BnaA05g18480DBnaA05g18480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTD7]
Coordinates
chrLK032219:+:112982..115615
Molecular Weight (calculated)
62297.6 Da
IEP (calculated)
6.783
GRAVY (calculated)
-0.493
Length
545 amino acids
Sequence
(BLAST)
001: MAVVGSRSRR AEMNWATICC SAFSCLQLYW ARLVIRKWFN VSSFDSDYSA DTDDDRLSLS GSQDFDPRSS GATNDDDCPK LRRRNSETFR VQYIDTQAVR
101: ICAGTWNVGG TVPPADLDID GWLDTLEPAD IYVLGLQEIV PLNAGNIFGI EDDQPASEWE NIIRDALNRV RPRNPKSLSH SDPPSPSMFK VSHDMFLETR
201: HGACDTFFSC ERPILSEDSL TNIEVLDSTN DNASPSMQIT SDSQREERFS YNERVGLSWP EPPLKLLNQY VLERRGGAFK SLNLSIMNLR KPAYVRIVSK
301: QMVGVFLTVW VRRSLRKHIS NLSVSNVGVG IMGYIGNKGS VSVSMSIYQT PFCFLCSHLS SGEKDTDHQK RNDDVREIHR RTLFHPHSSS ASVLPRSIRD
401: HERVIWLGDL NYRINLSYEK THELIARKEW QRLLENDQLS NEMRKGNVFE GWSEGVLCFP PTYKYEIDSE NYIGDDPESG KRRPAWCDRV IWKGKGMKLL
501: SYRRNEIKLS DHRPVTATFL AEVEVLSLWK LQRALAITYA EIQSQ
Best Arabidopsis Sequence Match ( AT1G34120.1 )
(BLAST)
001: MAEVRSRSRR TESNWATICC SAFSCLQLYW ARIVLRKWFN VSASESDYSA DSDDDYEDRS QEFDPISSGV TNPRVDTDDR PKLRRRNSET FRMQYIDTKA
101: IRICAGTWNV GGRVPSSDLD IDGWLDTLEP ADIYVLGLQE IVPLNAGNIF GMEDDQPALE WENLIRDALN RVQPRKLKIK SHSDPPSPSK FKQPEEVPYS
201: VEDMFVETSH DACDGISSMD NKLNSVESTD VPIVSEDSLT NIDVLGSTND NASCLPIQEY LQRQFSTPNT PDRSLSMQIN SDSKREERFS YTERVGLSWP
301: EPPLRLLNQY VSERRGSFKS VNLTITNLRK PSYVRIVSKQ MVGVFLTIWV RRNLRKHISN LCVSTVGVGI MGYIGNKGSV SVSMSIYQTP FCFLCTHLSS
401: GEKDTDQEKR NDDVREIHRR TQFLPHSLNA NELPRSICNH ERIIWLGDLN YRINLSYEKT HELIARKEWQ RLVEYDQLSR EMTKGNLFEG WSEGTLDFAP
501: TYKYEIDSEN YIGDDPESGK RRPAWCDRII WNGKGMKLFN YRRNEIKLSD HRPVTATFLA EVEVLSPRKL QHALTLTYAE IQGLDA
Arabidopsis Description
IP5P1Type I inositol polyphosphate 5-phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84MA2]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.