CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90734	Canola	mitochondrion	97.57	96.72
Bra000691.1-P	Field mustard	mitochondrion	95.83	92.45
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	62.43	66.73
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	62.61	66.06
CDY53817	Canola	nucleus	32.7	57.67
CDY53820	Canola	mitochondrion	26.61	52.58
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	46.96	51.92
GSMUA_AchrUn_...	Banana	nucleus	48.0	47.59
KXG22413	Sorghum	peroxisome	36.52	47.51
GSMUA_Achr7P13350_001	Banana	mitochondrion	45.04	47.26
CDY70508	Canola	cytosol	27.65	47.18
CDX68304	Canola	cytosol, nucleus, plastid	51.3	46.38
CDY37949	Canola	cytosol, nucleus, plastid	49.57	46.12
CDX72820	Canola	cytosol, nucleus, plastid	50.43	45.53
Zm00001d038831_P001	Maize	mitochondrion, nucleus	32.35	45.15
CDX96338	Canola	plastid	50.96	45.01
Os01t0183300-01	Rice	cytosol	47.65	44.84
CDY03700	Canola	cytosol, nucleus, plastid	49.57	44.12
TraesCS3A01G114900.1	Wheat	cytosol	44.87	43.95
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	43.83	43.22
KXG22411	Sorghum	mitochondrion	44.52	42.88
EES01371	Sorghum	plastid	48.52	42.86
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	47.48	42.66
Os01t0716800-01	Rice	plastid	50.09	42.6
TraesCS3B01G275500.1	Wheat	cytosol	48.52	41.58
CDX78819	Canola	nucleus	25.91	41.39
TraesCS3D01G246900.1	Wheat	cytosol	48.35	41.31
CDY09402	Canola	mitochondrion	30.61	41.03
TraesCS3A01G244500.1	Wheat	cytosol	47.83	40.92
Zm00001d038830_P002	Maize	plastid	41.57	40.85
CDY15795	Canola	mitochondrion	30.43	40.79
GSMUA_Achr10P...	Banana	cytosol	47.48	40.75
TraesCS1A01G357300.2	Wheat	cytosol	44.7	40.54
TraesCS1D01G361500.2	Wheat	cytosol	44.35	40.35
TraesCS3D01G117300.2	Wheat	mitochondrion	45.04	40.22
CDX79733	Canola	nucleus	30.61	40.0
Zm00001d043653_P004	Maize	plastid	49.57	39.97
TraesCS1B01G373800.3	Wheat	cytosol	46.26	39.7
HORVU1Hr1G080460.7	Barley	cytosol, golgi, mitochondrion, plastid	46.96	39.59
HORVU3Hr1G020880.11	Barley	cytosol	43.48	39.56
CDY53816	Canola	cytosol	16.52	39.26
HORVU3Hr1G067840.2	Barley	cytosol	48.52	39.08
Zm00001d039582_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	46.78	38.93
CDX91363	Canola	mitochondrion	32.0	38.49
CDX74960	Canola	mitochondrion	32.17	37.07
CDY15542	Canola	nucleus	35.13	36.86
CDY07789	Canola	mitochondrion	29.39	36.58
CDY33984	Canola	nucleus	29.91	36.36
CDY47282	Canola	nucleus	35.3	36.31
CDY10113	Canola	nucleus	35.13	36.2
CDX86576	Canola	nucleus	35.3	36.19
CDY15360	Canola	nucleus	34.96	36.02
CDX80935	Canola	nucleus	29.22	35.59
CDY18445	Canola	mitochondrion	30.61	35.48
CDX93379	Canola	mitochondrion	30.61	35.48
CDY04934	Canola	nucleus	28.87	35.1
CDY14134	Canola	plastid	28.87	35.1
CDY44496	Canola	nucleus	38.09	35.04
CDY56450	Canola	mitochondrion	34.09	34.88
CDX90428	Canola	nucleus	38.78	34.84
CDX76691	Canola	cytosol, mitochondrion, nucleus	33.91	34.76
CDY60962	Canola	cytosol, golgi, nucleus	34.96	34.6
Os05t0535600-00	Rice	cytosol, mitochondrion	21.39	33.61
CDY31285	Canola	nucleus	30.96	32.25
CDY08822	Canola	nucleus	31.65	31.43
CDY14538	Canola	nucleus	31.65	31.38
CDY68359	Canola	nucleus	28.35	30.75

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	GO:A0A078EV15	EnsemblPlants:CDY05076	ProteinID:CDY05076	ProteinID:CDY05076.1
InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0046856	EnsemblPlantsGene:GSBRNA2T00119837001	InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PFscan:PS51257
PANTHER:PTHR11200	PANTHER:PTHR11200:SF128	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0004EF062A	SEG:seg

Description

BnaC03g28740D

Coordinates

chrLK031959:-:455586..458612

Molecular Weight (calculated)

66594.8 Da

IEP (calculated)

8.094

GRAVY (calculated)

-0.679

Length

575 amino acids

Sequence
(BLAST)

001: MSPGRSQFRR TERSWATLCC SPVSSSCLQL YPARLLLRKW FNIPNTESDL APESDDEDQE DNDCADDSES EGIEEEGLLD SDDAQPELRR RNSETFRNQY
101: MDTKSVRICV GTWNVGGRVP PKDLDIDGWV DTIEPADIYV LGLQEIVPLN AGNIFGVEDD KPVSKWEDTI RDALNRIRPS RLKIISYSDP PSPSKFKQFE
201: EEISDVVKDM FTCNVIHPVD EDFEIEDGIV NTNYDKRSCL PRQEYLQRQF SSPKTLDRLL SVQLDDTGSK RAKSLNRWFS YSERVGLSWP EPPLRLLNQH
301: VRERRYFKPL MNVRKPSYVR IVSKQMVGVF LTVWVRRSLR KHIRNLSVST VGVGVMGYIG NKGAVSVSMS VYQTPFCFVC THLASGEKDG DHRKRNADVS
401: DIHRRTQFHP HSLNATRVPR SIRDHERIIW LGDLNYRINL SYKKTHELIA RKDWKKLAEK DQLAREMRQG RVFEGWSEGN LDFPPTYKYA IDSEIYRGKD
501: PKSGKRTPAW CDRIIWYGKG MKLMSYRRSE IKLSDHRPVT ATFVVEVEVF SPRKLQRTLT LTNAEIDSHE AFVQE

Best Arabidopsis Sequence Match ( AT1G34120.1 )
(BLAST)

001: MAEVRSRSRR TESNWATICC SAFSCLQLYW ARIVLRKWFN VSASESDYSA DSDDDYEDRS QEFDPISSGV TNPRVDTDDR PKLRRRNSET FRMQYIDTKA
101: IRICAGTWNV GGRVPSSDLD IDGWLDTLEP ADIYVLGLQE IVPLNAGNIF GMEDDQPALE WENLIRDALN RVQPRKLKIK SHSDPPSPSK FKQPEEVPYS
201: VEDMFVETSH DACDGISSMD NKLNSVESTD VPIVSEDSLT NIDVLGSTND NASCLPIQEY LQRQFSTPNT PDRSLSMQIN SDSKREERFS YTERVGLSWP
301: EPPLRLLNQY VSERRGSFKS VNLTITNLRK PSYVRIVSKQ MVGVFLTIWV RRNLRKHISN LCVSTVGVGI MGYIGNKGSV SVSMSIYQTP FCFLCTHLSS
401: GEKDTDQEKR NDDVREIHRR TQFLPHSLNA NELPRSICNH ERIIWLGDLN YRINLSYEKT HELIARKEWQ RLVEYDQLSR EMTKGNLFEG WSEGTLDFAP
501: TYKYEIDSEN YIGDDPESGK RRPAWCDRII WNGKGMKLFN YRRNEIKLSD HRPVTATFLA EVEVLSPRKL QHALTLTYAE IQGLDA

Arabidopsis Description

IP5P1Type I inositol polyphosphate 5-phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84MA2]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.