Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86576 | Canola | nucleus | 98.91 | 96.61 |
| CDY10113 | Canola | nucleus | 91.61 | 89.96 |
| CDY47282 | Canola | nucleus | 91.24 | 89.45 |
| Bra030611.1-P | Field mustard | nucleus | 98.36 | 86.38 |
| AT1G05470.2 | Thale cress | nucleus | 95.8 | 85.09 |
| CDY15360 | Canola | nucleus | 85.77 | 84.23 |
| CDY60962 | Canola | cytosol, golgi, nucleus | 85.4 | 80.55 |
| KRG91335 | Soybean | nucleus | 76.64 | 72.66 |
| VIT_05s0020g03770.t01 | Wine grape | cytosol, mitochondrion, nucleus | 75.0 | 72.49 |
| KRH35494 | Soybean | nucleus | 77.19 | 72.06 |
| KRH77819 | Soybean | nucleus | 75.18 | 71.16 |
| KRH27671 | Soybean | nucleus | 74.64 | 70.64 |
| KRH32792 | Soybean | cytosol | 33.21 | 68.68 |
| VIT_07s0151g00590.t01 | Wine grape | nucleus | 69.71 | 68.46 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 58.94 | 66.19 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 58.58 | 64.85 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 56.02 | 64.77 |
| KRH32041 | Soybean | nucleus | 65.88 | 64.58 |
| PGSC0003DMT400082071 | Potato | nucleus | 72.81 | 63.94 |
| Solyc09g082370.2.1 | Tomato | nucleus | 72.81 | 63.94 |
| KRH71395 | Soybean | nucleus | 65.15 | 63.75 |
| PGSC0003DMT400042059 | Potato | nucleus | 68.43 | 62.92 |
| KRH67243 | Soybean | nucleus | 63.87 | 62.84 |
| KRG95566 | Soybean | nucleus | 64.05 | 62.79 |
| Solyc09g065480.1.1 | Tomato | nucleus | 64.05 | 62.68 |
| PGSC0003DMT400049726 | Potato | nucleus | 63.87 | 62.5 |
| GSMUA_Achr2P08860_001 | Banana | cytosol | 48.91 | 62.18 |
| Solyc06g054010.2.1 | Tomato | nucleus | 66.97 | 61.89 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 57.12 | 60.89 |
| Os03t0793600-00 | Rice | nucleus | 62.77 | 60.88 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 55.84 | 60.47 |
| GSMUA_Achr8P26780_001 | Banana | endoplasmic reticulum | 55.47 | 60.08 |
| Os07t0175900-01 | Rice | cytosol | 62.04 | 59.65 |
| EER98050 | Sorghum | cytosol | 61.5 | 59.23 |
| EER93309 | Sorghum | nucleus | 60.95 | 59.22 |
| GSMUA_Achr3P14960_001 | Banana | nucleus | 57.12 | 59.17 |
| TraesCS5B01G434000.1 | Wheat | nucleus | 60.77 | 58.94 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 60.58 | 58.76 |
| KXG37885 | Sorghum | nucleus | 59.49 | 58.63 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 60.4 | 58.58 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 60.22 | 58.51 |
| Zm00001d013090_P002 | Maize | nucleus | 60.4 | 58.38 |
| TraesCS4D01G015900.2 | Wheat | nucleus | 60.04 | 58.33 |
| Zm00001d033451_P004 | Maize | nucleus | 59.49 | 58.32 |
| GSMUA_Achr7P25790_001 | Banana | nucleus | 53.83 | 58.3 |
| TraesCS4B01G017400.1 | Wheat | nucleus | 59.67 | 57.98 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 59.49 | 57.6 |
| EER92819 | Sorghum | cytosol, mitochondrion, nucleus | 60.77 | 57.51 |
| Os03t0160600-01 | Rice | mitochondrion | 60.4 | 57.47 |
| CDY56450 | Canola | mitochondrion | 58.76 | 57.3 |
| CDY70508 | Canola | cytosol | 35.22 | 57.27 |
| Zm00001d048434_P001 | Maize | mitochondrion | 60.58 | 57.14 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 58.39 | 57.04 |
| Zm00001d034410_P001 | Maize | plastid | 60.04 | 56.92 |
| Zm00001d013603_P006 | Maize | nucleus | 59.12 | 56.84 |
| TraesCS4D01G275200.1 | Wheat | nucleus | 59.67 | 56.28 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 59.49 | 55.92 |
| TraesCS4B01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 59.49 | 55.82 |
| HORVU5Hr1G104620.10 | Barley | nucleus | 60.95 | 55.76 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 59.12 | 55.67 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 59.85 | 55.59 |
| Zm00001d018929_P002 | Maize | cytosol | 60.77 | 55.13 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 56.93 | 54.36 |
| Zm00001d032935_P006 | Maize | nucleus | 58.58 | 54.31 |
| EER91601 | Sorghum | nucleus | 58.21 | 54.25 |
| CDX79733 | Canola | nucleus | 38.14 | 47.5 |
| CDX91363 | Canola | mitochondrion | 41.24 | 47.28 |
| CDY18445 | Canola | mitochondrion | 41.61 | 45.97 |
| CDX74960 | Canola | mitochondrion | 41.61 | 45.69 |
| CDX93379 | Canola | mitochondrion | 41.06 | 45.36 |
| CDY04934 | Canola | nucleus | 38.32 | 44.4 |
| CDY14134 | Canola | plastid | 38.32 | 44.4 |
| CDX80935 | Canola | nucleus | 38.14 | 44.28 |
| CDY07789 | Canola | mitochondrion | 37.23 | 44.16 |
| Os03t0663700-01 | Rice | nucleus | 23.36 | 43.99 |
| CDY33984 | Canola | nucleus | 37.96 | 43.97 |
| CDY53817 | Canola | nucleus | 25.91 | 43.56 |
| CDY15795 | Canola | mitochondrion | 33.03 | 42.19 |
| CDY09402 | Canola | mitochondrion | 32.66 | 41.72 |
| CDY53820 | Canola | mitochondrion | 20.99 | 39.52 |
| CDY31285 | Canola | nucleus | 39.23 | 38.95 |
| CDX78819 | Canola | nucleus | 25.18 | 38.33 |
| CDY08822 | Canola | nucleus | 40.15 | 38.0 |
| CDY28392 | Canola | cytosol, golgi, mitochondrion, plastid | 37.77 | 37.98 |
| CDX73292 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 37.23 | 37.92 |
| CDY14538 | Canola | nucleus | 39.96 | 37.76 |
| CDY05076 | Canola | mitochondrion | 36.86 | 35.13 |
| CDX90734 | Canola | mitochondrion | 37.04 | 35.0 |
| CDX72820 | Canola | cytosol, nucleus, plastid | 37.96 | 32.65 |
| CDX96338 | Canola | plastid | 38.32 | 32.26 |
| CDX68304 | Canola | cytosol, nucleus, plastid | 37.41 | 32.23 |
| CDY44496 | Canola | nucleus | 36.68 | 32.16 |
| CDX90428 | Canola | nucleus | 37.23 | 31.88 |
| CDY37949 | Canola | cytosol, nucleus, plastid | 33.94 | 30.1 |
| CDY03700 | Canola | cytosol, nucleus, plastid | 34.12 | 28.95 |
| CDY68359 | Canola | nucleus | 26.82 | 27.74 |
| CDY53816 | Canola | cytosol | 11.5 | 26.03 |
Protein Annotations
| MapMan:27.5.4.1 | Gene3D:3.60.10.10 | GO:A0A078FRU4 | UniProt:A0A078FRU4 | EnsemblPlants:CDY15542 | ProteinID:CDY15542 |
| ProteinID:CDY15542.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | EnsemblPlantsGene:GSBRNA2T00089716001 |
| InterPro:IPPc | InterPro:IPR036691 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF159 | SMART:SM00128 |
| SUPFAM:SSF56219 | UniParc:UPI0004EEFCF5 | SEG:seg | : | : | : |
Description
BnaA08g28260DBnaA08g28260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRU4]
Coordinates
chrLK032055:-:445104..449293
Molecular Weight (calculated)
63106.3 Da
IEP (calculated)
10.016
GRAVY (calculated)
-0.787
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MREDKSKTNK LAWSMKMVRK WFNIKSKTEE FQADHRSSFS AEKAPSTIKK TKTEKLSKNW EQQARQRRMN YENPRIVDVQ NYSIFTATWN VAGRSPPSDL
101: NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGAS GYHTPSPLPV PMAELDADFS GSTRQKNSTF FHRRSFQTPS
201: STWNDPSVSQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSSSSHRPSD YSRRPSDYSR RPSSTANENG YRMPWNTSQY CLVASKQMVG VFLTIWVKSE
301: LREHVKNMKV SCVGRGLMGY LGNKGSISIS MLLHQTSFCF VCTHLTSGQK EGDELKRNSD VMEILKKTRF PRVKSSEDEK SPENILQHDR VIWLGDLNYR
401: IALTYRSAKA LVEMQNWRAL LENDQLRIEQ KRGHVFKGWN EGKIYFPPTY KYSRNSDRYS GDDLHPKEKR RTPAWCDRIL WYGEGLHQLS YVRGESRFSD
501: HRPVYGIFCA EVESAHNKLK RTMSCSASRV QAEELFPYSR GYTELSFF
101: NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGAS GYHTPSPLPV PMAELDADFS GSTRQKNSTF FHRRSFQTPS
201: STWNDPSVSQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSSSSHRPSD YSRRPSDYSR RPSSTANENG YRMPWNTSQY CLVASKQMVG VFLTIWVKSE
301: LREHVKNMKV SCVGRGLMGY LGNKGSISIS MLLHQTSFCF VCTHLTSGQK EGDELKRNSD VMEILKKTRF PRVKSSEDEK SPENILQHDR VIWLGDLNYR
401: IALTYRSAKA LVEMQNWRAL LENDQLRIEQ KRGHVFKGWN EGKIYFPPTY KYSRNSDRYS GDDLHPKEKR RTPAWCDRIL WYGEGLHQLS YVRGESRFSD
501: HRPVYGIFCA EVESAHNKLK RTMSCSASRV QAEELFPYSR GYTELSFF
001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
Arabidopsis Description
IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.