Factsheet for TraesCS5B01G434000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G439900.1	Wheat	nucleus	97.88	97.88
TraesCS5A01G432000.1	Wheat	nucleus	97.35	97.35
HORVU5Hr1G104620.10	Barley	nucleus	97.7	92.15
Os03t0793600-00	Rice	nucleus	85.66	85.66
EER93309	Sorghum	nucleus	83.36	83.51
Zm00001d013090_P002	Maize	nucleus	81.59	81.31
Zm00001d034410_P001	Maize	plastid	82.12	80.28
GSMUA_Achr5P02940_001	Banana	nucleus	60.35	69.88
VIT_07s0151g00590.t01	Wine grape	nucleus	67.79	68.64
GSMUA_Achr4P21240_001	Banana	cytosol	57.35	68.35
GSMUA_Achr7P01420_001	Banana	nucleus	59.82	68.28
Solyc09g065480.1.1	Tomato	nucleus	66.37	66.96
PGSC0003DMT400049726	Potato	nucleus	66.19	66.79
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	66.9	66.67
KRH32041	Soybean	nucleus	63.54	64.22
KRH71395	Soybean	nucleus	63.19	63.75
KRH67243	Soybean	nucleus	62.3	63.2
KRG95566	Soybean	nucleus	62.48	63.15
TraesCS4B01G017400.1	Wheat	nucleus	62.83	62.94
KRH32792	Soybean	cytosol	29.2	62.26
AT3G63240.2	Thale cress	nucleus	59.29	61.24
GSMUA_Achr7P07740_001	Banana	cytosol	54.69	61.07
KRG91335	Soybean	nucleus	62.3	60.9
KRH77819	Soybean	nucleus	62.3	60.79
KRH27671	Soybean	nucleus	62.3	60.79
CDY15542	Canola	nucleus	58.94	60.77
GSMUA_Achr2P17460_001	Banana	nucleus	54.87	60.31
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	62.3	60.27
CDX86576	Canola	nucleus	59.47	59.89
CDY15360	Canola	nucleus	58.94	59.68
KRH35494	Soybean	nucleus	61.95	59.63
CDY47282	Canola	nucleus	58.94	59.57
CDY10113	Canola	nucleus	58.41	59.14
Bra007737.1-P	Field mustard	mitochondrion	59.65	58.92
CDY56450	Canola	mitochondrion	58.23	58.54
AT2G32010.3	Thale cress	nucleus	61.42	58.42
CDX76691	Canola	cytosol, mitochondrion, nucleus	57.88	58.29
PGSC0003DMT400042059	Potato	nucleus	61.42	58.22
Bra021766.1-P	Field mustard	nucleus	59.12	57.89
CDY60962	Canola	cytosol, golgi, nucleus	59.29	57.66
Solyc09g082370.2.1	Tomato	nucleus	63.36	57.37
PGSC0003DMT400082071	Potato	nucleus	63.19	57.21
Solyc06g054010.2.1	Tomato	nucleus	59.82	57.0
Bra015428.1-P	Field mustard	nucleus	57.7	55.92
AT1G05470.2	Thale cress	nucleus	60.18	55.11
Bra030611.1-P	Field mustard	nucleus	59.47	53.85
TraesCS7B01G086400.2	Wheat	nucleus, plastid	38.94	41.98
TraesCS1B01G316500.1	Wheat	plastid	40.88	41.77
TraesCS4B01G230100.1	Wheat	cytosol	33.98	41.38
TraesCS5B01G201300.1	Wheat	cytosol	30.97	41.18
TraesCS6B01G331500.1	Wheat	nucleus, plastid	41.77	39.33
TraesCS4B01G129000.1	Wheat	nucleus, plastid	39.65	38.96
TraesCS1B01G052100.1	Wheat	plastid	39.29	37.63
TraesCS3B01G369700.1	Wheat	nucleus	39.47	34.74
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	33.81	32.76
TraesCS3B01G275500.1	Wheat	cytosol	38.23	32.19
TraesCS1B01G373800.3	Wheat	cytosol	36.81	31.04

Protein Annotations

EnsemblPlants:TraesCS5B01G434000.1	EnsemblPlantsGene:TraesCS5B01G434000	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF130	PFAM:PF03372	SMART:SM00128	SUPFAM:SSF56219	MapMan:27.5.4.1

Description

No Description!

Coordinates

chr5B:+:609138917..609144044

Molecular Weight (calculated)

64884.5 Da

IEP (calculated)

9.383

GRAVY (calculated)

-0.710

Length

565 amino acids

Sequence
(BLAST)

001: MREESNKKTK VSWSKSLVRK WFNIKGKAQD FHADYDATTQ GRDGGDERRT SCSQRDAGAA KKSRTDRSLK RNVDRARRSR NEFDVSRLTE AQDYRIFAST
101: WNVGGKCPSR GLDLDDWLHS SPPADIYVLG FQEIVPLNAG NVLGTEDNVP AKKWVSLIRR TLNKNPGPSS HGGYRTPSPV PDPVVELDAD FEGSLRRQDS
201: SSFFHRRSFQ NLSRSLRVSG NDMFSQPRLD RRFSVCGPVN IGGRPSDFDG NFQCIGSPGD EYMDEDISNG AYFSPFPYGY GTSTPMEEDD EQPNTSRYCL
301: VASKQMVGIF LTVWVRSEIR NDIRNLKVSC VGRGLMGYLG NKGSISISMS LHHTTFCFVC CHLTSGEKEG DELRRNSDVM EILRKTRFPR VRGCGDVKSP
401: ETILEHDRIL WLGDLNYRIS LPYSSAKVLV ETHNWRQLLE RDQLRIERRC GHVFLGWKEG RIYFPPTYKY SFNSDRYSGY GVRPKEKRRT PAWCDRILWH
501: GTGLIQLSYV RGESRFSDHR PVYSIFMAEV EILHQRRRNM GYFSSRVEVE ELLPYAHSHG NIKFY

Best Arabidopsis Sequence Match ( AT1G05470.2 )
(BLAST)

001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF

Arabidopsis Description

IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.