CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013090_P002	Maize	nucleus	94.15	93.65
Zm00001d034410_P001	Maize	plastid	94.33	92.04
Os03t0793600-00	Rice	nucleus	85.28	85.13
TraesCS5D01G439900.1	Wheat	nucleus	83.51	83.36
TraesCS5B01G434000.1	Wheat	nucleus	83.51	83.36
TraesCS5A01G432000.1	Wheat	nucleus	83.51	83.36
EER98050	Sorghum	cytosol	79.96	79.26
HORVU5Hr1G104620.10	Barley	nucleus	83.51	78.63
GSMUA_Achr5P02940_001	Banana	nucleus	61.7	71.31
GSMUA_Achr4P21240_001	Banana	cytosol	59.22	70.46
GSMUA_Achr7P01420_001	Banana	nucleus	61.52	70.1
VIT_07s0151g00590.t01	Wine grape	nucleus	68.97	69.71
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	68.62	68.25
PGSC0003DMT400049726	Potato	nucleus	67.02	67.5
Solyc09g065480.1.1	Tomato	nucleus	67.02	67.5
KRH67243	Soybean	nucleus	65.43	66.25
KRH71395	Soybean	nucleus	65.6	66.07
KRH32041	Soybean	nucleus	65.43	66.01
KXG37885	Sorghum	nucleus	64.89	65.83
KRG95566	Soybean	nucleus	65.07	65.65
EER92819	Sorghum	cytosol, mitochondrion, nucleus	67.2	65.46
KRH32792	Soybean	cytosol	30.32	64.53
EER91601	Sorghum	nucleus	66.84	64.12
AT3G63240.2	Thale cress	nucleus	61.7	63.62
GSMUA_Achr7P07740_001	Banana	cytosol	56.74	63.24
GSMUA_Achr2P17460_001	Banana	nucleus	57.62	63.23
KRH77819	Soybean	nucleus	64.01	62.35
KRH27671	Soybean	nucleus	64.01	62.35
KRG91335	Soybean	nucleus	63.65	62.11
KRH35494	Soybean	nucleus	63.83	61.33
CDY15542	Canola	nucleus	59.22	60.95
CDY15360	Canola	nucleus	60.28	60.93
CDX86576	Canola	nucleus	60.11	60.43
CDY47282	Canola	nucleus	59.57	60.11
CDY10113	Canola	nucleus	59.22	59.86
Bra007737.1-P	Field mustard	mitochondrion	60.46	59.62
CDY56450	Canola	mitochondrion	59.22	59.43
PGSC0003DMT400042059	Potato	nucleus	62.77	59.4
AT2G32010.3	Thale cress	nucleus	62.41	59.26
CDX76691	Canola	cytosol, mitochondrion, nucleus	58.87	59.18
Solyc09g082370.2.1	Tomato	nucleus	65.07	58.81
CDY60962	Canola	cytosol, golgi, nucleus	60.46	58.69
PGSC0003DMT400082071	Potato	nucleus	64.89	58.65
Bra021766.1-P	Field mustard	nucleus	59.93	58.58
Solyc06g054010.2.1	Tomato	nucleus	60.82	57.84
Bra015428.1-P	Field mustard	nucleus	58.33	56.43
AT1G05470.2	Thale cress	nucleus	60.99	55.75
Bra030611.1-P	Field mustard	nucleus	59.93	54.17
EES15005	Sorghum	cytosol	30.14	41.56
OQU87743	Sorghum	plastid	40.6	41.56
KXG19625	Sorghum	nucleus	37.41	41.29
OQU89459	Sorghum	cytosol	31.21	41.12
EES15004	Sorghum	mitochondrion	29.08	41.1
EES18414	Sorghum	nucleus, plastid	39.01	40.59
KXG22413	Sorghum	peroxisome	31.74	40.5
KXG27642	Sorghum	plastid	40.6	40.39
EES18903	Sorghum	nucleus	38.83	40.33
KXG39809	Sorghum	nucleus	34.57	39.24
KXG30738	Sorghum	nucleus	39.18	38.24
KXG22411	Sorghum	mitochondrion	35.64	33.67
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	36.52	32.19
EES01371	Sorghum	plastid	36.88	31.95

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EntrezGene:8081271	UniProt:C5WY17	EnsemblPlants:EER93309	ProteinID:EER93309
ProteinID:EER93309.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc
InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF130	SMART:SM00128	EnsemblPlantsGene:SORBI_3001G059900
SUPFAM:SSF56219	UniParc:UPI0001A82B5C	RefSeq:XP_002466311.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:4485263..4490388

Molecular Weight (calculated)

64685.5 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.668

Length

564 amino acids

Sequence
(BLAST)

001: MREESNKKSK LSWSKSLVRK WFNIKSKAQE FHADCDAAQG RDGHGTEWRT SCSEREAGAA KKSRTDRSSK RSSMDRTRGG KNDVVDVACL TEVQNYRIFA
101: STWNVGGKSP PRGLNLDDWL HSSPPADIYV LGFQEIVPLN AGNVLGTEDN LPAKKWVSLV RRTLNKNPGS CCYGGYRTPS PVPDPVVEQD ADFEGSSRRQ
201: DSLSYLHRRS FNLSRSLRVE RNHMLSHPRL DRRFSVCDPV SLGGRPSDFD GNFPFMGSPD DHCIEEDTSN GAYFSPFPYG YGACAPMEEN DYQTNTSRYC
301: LVASKQMVGI FLTIWVRSEI RNDVRNLKVS CVGRGLMGYL GNKGSISISM SLHHTTFCFV CCHLTSGEKE GDELRRNSDV MEILRKTRFP QVRGAADVKS
401: PETILEHDRI IWLGDLNYRI ALSYCSAKAL VEMHSWKQLL EKDQLRIERR CGRVFQGWKE GRIYFPPTYK YSFNSDRYSG VRPKEKRRTP AWCDRILWYG
501: NGLMQLSYVR GESRFSDHRP VYSIFMAEVE SIRHRRRNVG YFSSRIEVEE LLPYPYSSGE MKFY

Best Arabidopsis Sequence Match ( AT2G32010.3 )
(BLAST)

001: MRDDKTKKSK LSWSKKMVRK WFNIKSKTEK FQADVSLPQG VEVEHRNSFS EREPCTIKKS KTEKLNKNWE QQARQRKMNY ENPRIIDVQN HSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF

Arabidopsis Description

IP5P7CVL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.