CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048434_P001	Maize	mitochondrion	97.58	97.25
Os03t0160600-01	Rice	mitochondrion	94.3	94.79
HORVU4Hr1G073350.1	Barley	cytosol, mitochondrion, nucleus	88.95	88.49
TraesCS4D01G275200.1	Wheat	nucleus	88.77	88.47
TraesCS4A01G029300.1	Wheat	cytosol, mitochondrion, nucleus	88.95	88.34
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	88.95	88.18
EER91601	Sorghum	nucleus	78.93	77.72
GSMUA_Achr2P08860_001	Banana	cytosol	56.65	76.1
GSMUA_Achr8P26780_001	Banana	endoplasmic reticulum	64.77	74.11
VIT_07s0151g00590.t01	Wine grape	nucleus	70.98	73.66
GSMUA_Achr3P14960_001	Banana	nucleus	66.84	73.16
PGSC0003DMT400049726	Potato	nucleus	69.26	71.61
Solyc09g065480.1.1	Tomato	nucleus	68.91	71.25
GSMUA_Achr7P25790_001	Banana	nucleus	62.18	71.15
KRH32041	Soybean	nucleus	68.22	70.66
KRG95566	Soybean	nucleus	68.05	70.48
KRH67243	Soybean	nucleus	67.7	70.38
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	68.57	70.02
KRH71395	Soybean	nucleus	66.49	68.75
KRH32792	Soybean	cytosol	31.26	68.3
EER93309	Sorghum	nucleus	65.46	67.2
KRH77819	Soybean	nucleus	66.84	66.84
KRH27671	Soybean	nucleus	66.49	66.49
KRG91335	Soybean	nucleus	65.98	66.09
EER98050	Sorghum	cytosol	64.94	66.08
AT3G63240.2	Thale cress	nucleus	62.0	65.63
KXG37885	Sorghum	nucleus	62.52	65.11
KRH35494	Soybean	nucleus	65.98	65.08
CDY15360	Canola	nucleus	60.45	62.72
CDY47282	Canola	nucleus	59.59	61.72
CDX76691	Canola	cytosol, mitochondrion, nucleus	59.76	61.68
Bra007737.1-P	Field mustard	mitochondrion	60.79	61.54
CDY56450	Canola	mitochondrion	59.59	61.39
CDY10113	Canola	nucleus	59.07	61.29
AT2G32010.3	Thale cress	nucleus	62.35	60.77
CDY15542	Canola	nucleus	57.51	60.77
Bra021766.1-P	Field mustard	nucleus	60.45	60.66
CDY60962	Canola	cytosol, golgi, nucleus	60.79	60.59
Solyc09g082370.2.1	Tomato	nucleus	64.94	60.26
PGSC0003DMT400082071	Potato	nucleus	64.59	59.94
CDX86576	Canola	nucleus	58.03	59.89
PGSC0003DMT400042059	Potato	nucleus	60.28	58.56
Bra015428.1-P	Field mustard	nucleus	58.55	58.15
Solyc06g054010.2.1	Tomato	nucleus	58.72	57.34
AT1G05470.2	Thale cress	nucleus	60.97	57.21
Bra030611.1-P	Field mustard	nucleus	59.41	55.13
KXG19625	Sorghum	nucleus	37.31	42.27
OQU87743	Sorghum	plastid	40.07	42.11
EES18414	Sorghum	nucleus, plastid	39.03	41.7
EES15005	Sorghum	cytosol	29.02	41.08
OQU89459	Sorghum	cytosol	30.22	40.89
EES18903	Sorghum	nucleus	38.34	40.88
KXG22413	Sorghum	peroxisome	30.92	40.5
KXG27642	Sorghum	plastid	39.55	40.39
EES15004	Sorghum	mitochondrion	27.81	40.35
KXG30738	Sorghum	nucleus	38.69	38.75
KXG39809	Sorghum	nucleus	32.64	38.03
KXG22411	Sorghum	mitochondrion	34.89	33.84
EES01371	Sorghum	plastid	36.61	32.57
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.72	31.41

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EntrezGene:8082153	UniProt:C5WWY7	EnsemblPlants:EER92819	ProteinID:EER92819
ProteinID:EER92819.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc
InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF157	SMART:SM00128	EnsemblPlantsGene:SORBI_3001G496900
SUPFAM:SSF56219	UniParc:UPI0001A82B2E	RefSeq:XP_002465821.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:76688048..76700046

Molecular Weight (calculated)

65985.4 Da

IEP (calculated)

9.492

GRAVY (calculated)

-0.703

Length

579 amino acids

Sequence
(BLAST)

001: MRDGSNTTKK SKLSWSKSLV RKWFNIRSKA HDFHADDVPA IGRTVAGGGD DEWRRGSSFT RREPSTVKKS KTERSSRRSN GHSRRGKIDL DAAEATVTLD
101: YRIFVATWNV AGRSPPNNMS LEDWLHAAPP ADIYVLGFQE IVPLNAGNVL GTEDNVPAKR WVSLVRRTLN NLPGTSGNGS FRTPSPAPNP VVEIDDDFEG
201: LSSRQNNATF FHRRSFQAGL SRSLRMEGDI LAPQPRLERR YSVCDRAIYG RRPSDYENNY RWGGSSDDEN NTGESPSTVY SPMSYGYGNA SSLEDSQRRA
301: GQTRYCLVAS KQMVGLFLMI WARKDIRDDI RNLKVSCVGR GLMGYLGNKG SISISMSLHQ TSFCFVCSHL TSGQKEGDEL RRNSDVLEIL RKTRFPMVYG
401: QYEHSPETIL EHDRIIWLGD LNYRIALSYR SVKALVEMRN WKALLEKDQL RIEQRGGRVF VGWSEGNIYF PPTYKYSNNS DKYAGDDMNQ KEKRRTPAWC
501: DRILWYGRGL GQLSYVRGES RFSDHRPVYS VFSAEVESIN HSRIQKMSCS SSQLDIEELL PYSYGYTDIN PYGYDLNFY

Best Arabidopsis Sequence Match ( AT3G63240.1 )
(BLAST)

001: MGDGNLKKSK LSWPKTLVKK WLNIKSKSED FHADDLDRGE GGGDWRNNVI EREEACSVRK SKTETRSKRN SGRARRNKLD VDPPLDHLRV FTATWNVAGK
101: SPPSYLNLDD WLHTSPPSDI YVLGFQEIVP LNAGNVLGTE DNGPARKWVS LIRRTLNSLP GGSCQTPSPV PHPVAELDSD FEGDSAAGAN SLFYHRSRSM
201: RMDASASSLP QQFDRRFSVC DRFMLGDTPD DFYDQSFRYC SSEDEPADSP CHDHYSPVSR TGSFVADDRD KGRDKSKYCL VASKQMVGIF LTVWVKSDLR
301: DSVNNLKVSC VGRGLMGYLG NKGSISISMS VHQTSFCFVC SHLTSGQKEG DELRRNSDVL EILRKTRFPR VNNAGDDKSP QMISEHDRVI WLGDLNYRIA
401: LSYRSAKALV EMRDWRALLE KDQLRIEQRK GCVFEGWKEG TIYFPPTYKY SNNSDIYAGD DRLPKAKRRT PAWCDRILWH GSGISQLSYV RGESRFSDHR
501: PVYSLFSVEI ESAYRNRIKK SSSYTSSRIE VEELLPQRYG YSELNPY

Arabidopsis Description

IP5P4Type I inositol polyphosphate 5-phosphatase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.