CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
golgi 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028366_P001	Maize	cytosol	84.91	92.75
Zm00001d047972_P001	Maize	mitochondrion	83.3	80.7
TraesCS4A01G073900.1	Wheat	cytosol	73.44	78.49
TraesCS4D01G231500.1	Wheat	cytosol	73.24	78.28
TraesCS4B01G230100.1	Wheat	cytosol	72.84	78.02
Os03t0238300-01	Rice	cytosol	77.26	77.58
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	72.23	67.35
PGSC0003DMT400058661	Potato	plastid	31.59	61.57
Solyc01g005090.2.1	Tomato	nucleus	41.05	58.45
GSMUA_Achr7P11300_001	Banana	mitochondrion	46.68	58.44
Bra026626.1-P	Field mustard	mitochondrion	49.9	57.81
CDY09402	Canola	mitochondrion	49.9	57.81
CDY15795	Canola	mitochondrion	49.3	57.11
AT2G01900.3	Thale cress	mitochondrion	48.29	56.47
GSMUA_Achr10P...	Banana	mitochondrion	49.5	56.16
Solyc06g072390.2.1	Tomato	cytosol	10.87	55.67
VIT_01s0011g06310.t01	Wine grape	mitochondrion	47.48	53.76
PGSC0003DMT400069298	Potato	cytosol	35.01	53.21
KRH58596	Soybean	mitochondrion	46.28	52.87
KRH40911	Soybean	cytosol	46.68	51.33
KRH42503	Soybean	cytosol	45.47	51.02
KRH66073	Soybean	plastid	45.67	50.44
KRG89097	Soybean	cytosol	45.67	50.22
EES15005	Sorghum	cytosol	41.05	49.88
EES15004	Sorghum	mitochondrion	40.04	49.87
Solyc03g098030.2.1	Tomato	cytosol	37.83	49.09
OQU89459	Sorghum	cytosol	42.05	48.83
KRH48717	Soybean	cytosol	37.42	47.21
Solyc06g072400.1.1	Tomato	extracellular, plasma membrane, vacuole	25.35	39.87
KXG22413	Sorghum	peroxisome	30.99	34.84
EER93309	Sorghum	nucleus	39.24	34.57
EER98050	Sorghum	cytosol	39.24	34.27
KXG19625	Sorghum	nucleus	35.21	34.25
KXG37885	Sorghum	nucleus	38.23	34.17
EES18903	Sorghum	nucleus	37.22	34.07
KRH16316	Soybean	cytosol	8.05	33.33
OQU87743	Sorghum	plastid	36.62	33.03
EER92819	Sorghum	cytosol, mitochondrion, nucleus	38.03	32.64
EES18414	Sorghum	nucleus, plastid	35.21	32.29
EER91601	Sorghum	nucleus	37.83	31.97
KXG27642	Sorghum	plastid	35.41	31.04
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	52.31	29.85
KXG30738	Sorghum	nucleus	34.61	29.76
KXG22411	Sorghum	mitochondrion	34.81	28.98
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	37.22	28.91
EES01371	Sorghum	plastid	35.41	27.04

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	UniProt:A0A1B6QPG1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	EnsemblPlants:KXG39809	ProteinID:KXG39809	ProteinID:KXG39809.1
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF141	SMART:SM00128	EnsemblPlantsGene:SORBI_3001G442500	SUPFAM:SSF56219
UniParc:UPI0001C80A9C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:71997758..72001265

Molecular Weight (calculated)

55814.0 Da

IEP (calculated)

8.952

GRAVY (calculated)

-0.559

Length

497 amino acids

Sequence
(BLAST)

001: MLENQKQAEV GQPERTHAHS PRSLVVLFRS DVLWPRLVAN KLFRKTSGSH AFVADFPAAD DDDDDNNNVV FGTEFDDGGC SPDADASRCV KRPRPQERNK
101: TLKYKLFAST WNVGGVAPPD DLDLSDWLDG GEDDDGPYDM YVLGLQEVVP LRARNVLGAD KKRVGLRWIE LIRAALNRRS HSQRQRQQGD GSGKQKVHPV
201: RDGGRGELAC RDYRCVVSKQ MVGILLTVWV RSDLRRFVRR PSVSCVGCGV MGCLGNKGAV SVRFWLHDTS FCFVCCHLAS GGREGDEAHR NADATEILSR
301: TTFPRGHALN LPLPHKILDH DRVILLGDLN YRISLPEAKT RLLVERQDWK TLLENDQLRA ELVCRGGAFQ GWSEGAITFS PTYKYYPNSD AYYGCATAGQ
401: GHRSNKRRAP AWCDRILWRG AGLRQTRYGR CESRLSDHRP VRAVFTVEVD APRNLNSLRS FFMSERFDRA GSRSPGAADQ LLRKDDVVNS ARFGDTL

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.