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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039582_P002 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 86.88 80.46
Os01t0183300-01 Rice cytosol 68.12 71.36
TraesCS3B01G134300.1 Wheat cytosol, nucleus, plastid 64.22 70.5
TraesCS3A01G114900.1 Wheat cytosol 63.91 69.68
HORVU3Hr1G020880.11 Barley cytosol 64.22 65.03
TraesCS3D01G117300.2 Wheat mitochondrion 63.75 63.35
CDY53817 Canola nucleus 29.22 57.36
GSMUA_Achr7P13350_001 Banana mitochondrion 48.12 56.2
CDY53820 Canola mitochondrion 25.31 55.67
CDX73292 Canola cytosol, endoplasmic reticulum, mitochondrion, nucleus 42.34 50.37
KRG91711 Soybean cytosol, mitochondrion, nucleus, plastid 49.22 49.92
GSMUA_Achr10P... Banana cytosol 52.19 49.85
CDY28392 Canola cytosol, golgi, mitochondrion, plastid 42.03 49.36
Bra034444.1-P Field mustard cytosol, golgi, mitochondrion, plastid 42.03 49.36
KRH35060 Soybean cytosol, mitochondrion, nucleus, plastid 48.59 49.29
KXG22413 Sorghum peroxisome 33.91 49.09
KRH70253 Soybean cytosol, endoplasmic reticulum, mitochondrion, plastid 48.12 48.2
CDX90734 Canola mitochondrion 43.28 47.76
KRH08618 Soybean cytosol, golgi, mitochondrion, plastid 47.66 47.58
CDY05076 Canola mitochondrion 42.66 47.48
Bra000691.1-P Field mustard mitochondrion 44.06 47.32
CDX68304 Canola cytosol, nucleus, plastid 46.56 46.86
PGSC0003DMT400064482 Potato cytosol, mitochondrion, nucleus, plastid 48.59 46.63
AT1G34120.2 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 42.97 46.61
CDX72820 Canola cytosol, nucleus, plastid 46.25 46.47
VIT_18s0157g00210.t01 Wine grape plastid 51.25 46.26
KXG22411 Sorghum mitochondrion 42.66 45.73
CDX96338 Canola plastid 46.41 45.62
Bra003916.1-P Field mustard cytosol, nucleus, plastid 47.03 45.47
EES01371 Sorghum plastid 46.09 45.31
CDY37949 Canola cytosol, nucleus, plastid 43.75 45.31
AT1G71710.1 Thale cress cytosol, nucleus, plastid 46.72 45.03
Bra016124.1-P Field mustard plastid 46.41 44.07
CDY03700 Canola cytosol, nucleus, plastid 43.28 42.88
Bra007969.1-P Field mustard cytosol, nucleus, plastid 45.47 41.63
EES15005 Sorghum cytosol 25.94 40.59
CDY53816 Canola cytosol 15.16 40.08
EES15004 Sorghum mitochondrion 24.22 38.85
KXG39809 Sorghum nucleus 28.91 37.22
KXG37885 Sorghum nucleus 31.88 36.69
EER93309 Sorghum nucleus 32.19 36.52
EER98050 Sorghum cytosol 32.34 36.38
OQU89459 Sorghum cytosol 24.06 35.98
EER92819 Sorghum cytosol, mitochondrion, nucleus 31.41 34.72
EER91601 Sorghum nucleus 31.41 34.18
KXG19625 Sorghum nucleus 27.03 33.86
EES18903 Sorghum nucleus 28.44 33.52
OQU87743 Sorghum plastid 27.5 31.94
EES18414 Sorghum nucleus, plastid 26.72 31.55
KRH04678 Soybean cytosol 16.72 31.38
KXG27642 Sorghum plastid 27.19 30.69
KXG30738 Sorghum nucleus 27.66 30.62
Protein Annotations
MapMan:27.5.4.1Gene3D:3.60.10.10EntrezGene:8084384UniProt:C5XMM8EnsemblPlants:EES00172ProteinID:EES00172
ProteinID:EES00172.1InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphataseGO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0046856InterPro:IPPc
InterPro:IPR036691PFAM:PF03372PANTHER:PTHR11200PANTHER:PTHR11200:SF235SMART:SM00128EnsemblPlantsGene:SORBI_3003G040600
SUPFAM:SSF56219unigene:Sbi.21371UniParc:UPI0001A844B4RefSeq:XP_002455052.1SEG:seg:
Description
hypothetical protein
Coordinates
chr3:+:3769210..3772791
Molecular Weight (calculated)
71023.2 Da
IEP (calculated)
5.308
GRAVY (calculated)
-0.579
Length
640 amino acids
Sequence
(BLAST)
001: MVVQKQRRAP AEVFWPKIVL KKWLNLKSKD LDFGADDDEE DDEEDDGSSD VDGQENCGCD DDRGGSARRP AEDGAHITDE SLESAPYKLR RRNSETLRAQ
101: YINTKELRVC VGTWNAGGKA PPDDLDIAEW LGTGGDAEPA DIYVLGFQEV VPLNAGNVFG AEDGRPALAW ESVIRGALRR AQPSRPRYRC YSHPPSPSRF
201: DPPVDAAAAA DELLPGGTDT ETDTDEDVPF SFPVRAEEYV AATPRKLSRL NHFSVVVDEK ENGSSELNGD ELDDGPDQPP PPQQQQLGLQ QRALLRSLSR
301: ADRVGLVWPE QPLDLLPPRA MNAASSFKAS KSFKSFRGSF RSRVADAAAA DDLPMIPDLD LDLDGALRKK SRSPFVRIVS KQMVGIFLTV WVRRGLRKCV
401: QNLKVSTVGV GAMGYIGNKG AVSVSMSVYQ TMFCFVCSHL AAGEKPGDVH KRNADVHEIH RRTRFAAPGD LQLPRDIHDH DRIFWLGDLN YRLDASYERA
501: HELILEGRWG ELAETDQLKR ELRKGRAFDG WTEGILEFAP TYKYELSSRR YVGVGVGDDQ SHRGGGGRRT PAWCDRVLSY GKGMRLLGYR RSELALSDHR
601: PVTATYAAEV EVFSSRKLQR ALTLTDAEVE GGQVVPDLDF
Best Arabidopsis Sequence Match ( AT1G34120.2 )
(BLAST)
001: MAEVRSRSRR TESNWATICC SAFSCLQLYW ARIVLRKWFN VSASESDYSA DSDDDYEDRS QEFDPISSGV TNPRVDTDGN VIYRPKLRRR NSETFRMQYI
101: DTKAIRICAG TWNVGGRVPS SDLDIDGWLD TLEPADIYVL GLQEIVPLNA GNIFGMEDDQ PALEWENLIR DALNRVQPRK LKIKSHSDPP SPSKFKQPEE
201: VPYSVEDMFV ETSHDACDGI SSMDNKLNSV ESTDVPIVSE DSLTNIDVLG STNDNASCLP IQEYLQRQFS TPNTPDRSLS MQINSDSKRE ERFSYTERVG
301: LSWPEPPLRL LNQYVSERRG SFKSVNLTIT NLRKPSYVRI VSKQMVGVFL TIWVRRNLRK HISNLCVSTV GVGIMGYIGN KGSVSVSMSI YQTPFCFLCT
401: HLSSGEKDTD QEKRNDDVRE IHRRTQFLPH SLNANELPRS ICNHERIIWL GDLNYRINLS YEKTHELIAR KEWQRLVEYD QLSREMTKGN LFEGWSEGTL
501: DFAPTYKYEI DSENYIGDDP ESGKRRPAWC DRIIWNGKGM KLFNYRRNEI KLSDHRPVTA TFLAEVEVLS PRKLQHALTL TYAEIQGLDA
Arabidopsis Description
IP5P1Type I inositol polyphosphate 5-phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84MA2]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.