CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91711	Soybean	cytosol, mitochondrion, nucleus, plastid	94.61	94.61
KRH08618	Soybean	cytosol, golgi, mitochondrion, plastid	74.8	73.63
KRH70253	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plastid	74.01	73.08
CDY53817	Canola	nucleus	34.23	66.26
CDY53820	Canola	mitochondrion	28.84	62.54
VIT_18s0157g00210.t01	Wine grape	plastid	66.4	59.1
GSMUA_Achr4P08910_001	Banana	endoplasmic reticulum	47.39	57.5
PGSC0003DMT400064482	Potato	cytosol, mitochondrion, nucleus, plastid	59.11	55.92
GSMUA_AchrUn_...	Banana	nucleus	50.87	55.34
CDX68304	Canola	cytosol, nucleus, plastid	55.15	54.72
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	56.74	54.08
AT1G71710.1	Thale cress	cytosol, nucleus, plastid	56.89	54.07
CDX72820	Canola	cytosol, nucleus, plastid	54.36	53.85
CDY37949	Canola	cytosol, nucleus, plastid	52.46	53.56
CDX96338	Canola	plastid	54.68	53.0
KXG22413	Sorghum	peroxisome	37.08	52.94
KRH37570	Soybean	cytosol	9.35	52.68
Zm00001d038831_P001	Maize	mitochondrion, nucleus	33.91	51.94
Bra016124.1-P	Field mustard	plastid	55.47	51.93
CDY03700	Canola	cytosol, nucleus, plastid	52.46	51.24
GSMUA_Achr7P13350_001	Banana	mitochondrion	44.37	51.09
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	55.15	49.79
Os01t0183300-01	Rice	cytosol	47.86	49.43
KRG89576	Soybean	cytosol	8.72	49.11
EES00172	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	49.29	48.59
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	44.85	48.54
EES01371	Sorghum	plastid	49.76	48.23
TraesCS3D01G246900.1	Wheat	cytosol	51.35	48.14
TraesCS3B01G275500.1	Wheat	cytosol	51.19	48.14
TraesCS3A01G114900.1	Wheat	cytosol	44.69	48.04
TraesCS3A01G244500.1	Wheat	cytosol	50.87	47.77
Os01t0716800-01	Rice	plastid	50.87	47.49
CDY53816	Canola	cytosol	17.75	46.28
KXG22411	Sorghum	mitochondrion	43.74	46.23
GSMUA_Achr10P...	Banana	cytosol	48.65	45.82
HORVU3Hr1G067840.2	Barley	cytosol	51.19	45.24
HORVU3Hr1G020880.11	Barley	cytosol	45.01	44.94
Zm00001d043653_P004	Maize	plastid	50.55	44.74
Zm00001d039582_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	48.49	44.28
KRH32792	Soybean	cytosol	18.54	44.15
TraesCS3D01G117300.2	Wheat	mitochondrion	45.01	44.1
TraesCS1A01G357300.2	Wheat	cytosol	43.74	43.53
TraesCS1D01G361500.2	Wheat	cytosol	43.42	43.35
Zm00001d038830_P002	Maize	plastid	40.1	43.25
KRH77232	Soybean	cytosol	38.99	43.01
KRH04678	Soybean	cytosol	23.14	42.82
TraesCS1B01G373800.3	Wheat	cytosol	44.85	42.24
HORVU1Hr1G080460.7	Barley	cytosol, golgi, mitochondrion, plastid	45.01	41.64
KRH04304	Soybean	cytosol, mitochondrion, nucleus	40.89	41.02
KRH71395	Soybean	nucleus	35.97	40.54
KRH57586	Soybean	nucleus	39.94	40.38
KRH32041	Soybean	nucleus	35.66	40.25
KRH28263	Soybean	cytosol	40.1	40.16
KRH67243	Soybean	nucleus	35.34	40.04
KRG95566	Soybean	nucleus	35.02	39.53
Os05t0535600-00	Rice	cytosol, mitochondrion	22.82	39.34
KRH19738	Soybean	nucleus	29.0	39.19
KRH32331	Soybean	mitochondrion	28.68	39.09
KRH48717	Soybean	cytosol	24.41	39.09
KRH77819	Soybean	nucleus	35.66	38.86
KRH27671	Soybean	nucleus	35.66	38.86
KRG95832	Soybean	nucleus	28.84	38.72
KRG91335	Soybean	nucleus	35.34	38.58
KRH35494	Soybean	nucleus	35.66	38.33
KRH58596	Soybean	mitochondrion	26.15	37.93
KRH67562	Soybean	nucleus	29.16	37.32
KRH42503	Soybean	cytosol	26.15	37.25
KRH18550	Soybean	cytosol	26.78	36.5
KRG93446	Soybean	cytosol	26.94	36.4
KRH40911	Soybean	cytosol	25.83	36.06
KRH66073	Soybean	plastid	25.67	36.0
KRG89097	Soybean	cytosol	25.67	35.84
KRH16316	Soybean	cytosol	6.66	35.0
KRH13212	Soybean	nucleus	27.89	34.85
KRH20549	Soybean	nucleus	27.89	34.71
KRH43218	Soybean	nucleus	30.11	32.59
KRH59383	Soybean	nucleus	29.79	32.25

Protein Annotations

EntrezGene:100799000	MapMan:27.5.4.1	Gene3D:3.60.10.10	EMBL:ACUP02006650	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
EnsemblPlantsGene:GLYMA_10G221000	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	UniProt:I1LDC4	InterPro:IPPc	InterPro:IPR036691
ProteinID:KRH35058.1	ProteinID:KRH35059.1	EnsemblPlants:KRH35060	ProteinID:KRH35060	ProteinID:KRH35060.1	ProteinID:KRH35061.1
ProteinID:KRH35062.1	ProteinID:KRH35063.1	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF128	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI000233C35C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:45225655..45239057

Molecular Weight (calculated)

72178.0 Da

IEP (calculated)

5.791

GRAVY (calculated)

-0.736

Length

631 amino acids

Sequence
(BLAST)

001: MKQGSANNQQ LFWARVVMRK WLNMASNEPD YTADPDDDNE DDPESDSDNE ELGKRTRFGD SREEQAPIES NEFLPRLRRQ KSLTSRSQYI NKKELRVCVG
101: TWNVGGKLPS DDLDIDDWLG INEPADIYVL GLQEIVPLNP GNIFGAEDTR PVPKWENIIR DTLNRVRPKA PKMKSFSDPP SPSKFKPSDD APDIEEEILL
201: ESDGDIGEEV HPLDEEHNVY DGGADKPTTY EEASNTNFQA SDAADIANTE EPIGNDLKRQ FSDGKRLSRL NCFRDENLPK KTETSSSQQA SKLSRMISSS
301: DRIGLSWPEP PLHLLSQGPL DRPTSFKSVR SFSASKSFRT CQTFKKTIDD IGLLAEIDLE ALMKRKRRSS YVRIVSKQMV GIFITIWVRR SLRKHIQNLK
401: VSTVGVGVMG YIGNKGSISI SMSIYQTLFC FICTHLTAGE KEGDEHKRNA DVREIHQRTH FYSLADIGVP RNILDHERII WLGDLNYRIN LSYEKTRDFI
501: SKKQWSKLIE KDQLSKELEK GVFGGWSEGK LNFPPTYKYE NNSDKYYGED PKVGRRTPSW CDRILSYGMG MRLLRYGRTE LRFSDHRPVT ATYMAEVEVF
601: SPRKLQKALT FTDAEIENEE VMATLGTLYE F

Best Arabidopsis Sequence Match ( AT1G71710.2 )
(BLAST)

001: MKKSHRQKSQ RLWAKLVMRK WLNISGRDPE YGADTDNESE NEDAREDNDD SSSDEEGGSG SRGRESKVYE NAEDAIAAAS AVVDAAAAAA EFISNDAPMK
101: LRRRNSETLR AQYINNKEIR VCVGTWNVGG ISPPSDLDID DWIEINQPAD IYVLGLQEIV PLNAGNILGA EDDRPVAKWE EVIREALNRV RPKLSGVKSY
201: SDPPSPGRFK PFEETHDIIE EEVAFESDSD AGVEIHPIDE EEEEETDRLW ALKHDGGVIG EVKTLVDPNT GLPVVEIKRQ FSIPKKLDRQ LCLRADSFKG
301: ISDDDSTQTG MKTINRMLSG KERIGLSWPE PPLNMLGPCV LDRQPSIKTV KSLKTAKSFK AYSSFKSVAG NNNGIPPEVL ALAEMDLKLL MERKRRPAYV
401: RLVSKQMVGI LLTIWVKRSL RKHIQNVRVS TVGVGVMGYI GNKGAVSVSM SINQTFFCFI NTHLTAGERE VDQIKRNADV HEIHKRTVFH SVSALGLPKL
501: IYDHERIIWL GDLNYRLSSS YEKTRDLISK REWSKLLEYD QLVKEYRKGR AFDGWSEGTL HFPPTYKYQA NSDEYTANDG KAPKRTPAWC DRVLSYGKGM
601: RLVHYRRTEQ KFSDHRPVTA IYMAEVEVFS ARKLQRALTF TDAEIEDEGL VAVLV

Arabidopsis Description

IP5P3Type IV inositol polyphosphate 5-phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Z6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.