CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09402	Canola	mitochondrion	96.97	96.97
AT2G01900.3	Thale cress	mitochondrion	82.52	83.29
PGSC0003DMT400058661	Potato	plastid	39.16	65.88
Solyc01g005090.2.1	Tomato	nucleus	52.91	65.04
VIT_01s0011g06310.t01	Wine grape	mitochondrion	61.77	60.36
KRH58596	Soybean	mitochondrion	59.67	58.85
KRH40911	Soybean	cytosol	60.61	57.52
KRG89097	Soybean	cytosol	60.61	57.52
KRH42503	Soybean	cytosol	58.74	56.88
KRH66073	Soybean	plastid	59.44	56.67
GSMUA_Achr9P15810_001	Banana	cytosol	43.59	55.82
GSMUA_Achr7P11300_001	Banana	mitochondrion	49.65	53.65
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	45.45	53.28
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	47.55	51.91
Zm00001d028366_P001	Maize	cytosol	55.01	51.87
TraesCS4A01G073900.1	Wheat	cytosol	56.18	51.83
TraesCS4B01G230100.1	Wheat	cytosol	55.94	51.72
KRH16316	Soybean	cytosol	14.45	51.67
TraesCS4D01G231500.1	Wheat	cytosol	55.94	51.61
GSMUA_Achr10P...	Banana	mitochondrion	50.58	49.54
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	46.62	49.51
Os09t0394600-01	Rice	mitochondrion	46.15	49.38
KXG39809	Sorghum	nucleus	57.11	49.3
Os03t0238300-01	Rice	cytosol	56.64	49.09
Zm00001d032253_P003	Maize	cytosol	38.93	48.69
CDY70508	Canola	cytosol	38.0	48.37
TraesCS5B01G201300.1	Wheat	cytosol	47.32	47.76
OQU89459	Sorghum	cytosol	47.55	47.66
Zm00001d047972_P001	Maize	mitochondrion	55.24	46.2
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	55.94	45.03
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	45.45	43.82
EES15005	Sorghum	cytosol	41.72	43.77
EES15004	Sorghum	mitochondrion	40.56	43.61
Os08t0425500-01	Rice	cytosol	41.49	43.0
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	45.45	40.97
CDY53817	Canola	nucleus	28.9	38.04
CDX79733	Canola	nucleus	37.06	36.14
CDX80935	Canola	nucleus	38.93	35.38
CDX91363	Canola	mitochondrion	39.39	35.36
CDY14134	Canola	plastid	38.93	35.31
CDY04934	Canola	nucleus	38.93	35.31
CDY53820	Canola	mitochondrion	23.54	34.71
CDX74960	Canola	mitochondrion	39.86	34.27
CDY18445	Canola	mitochondrion	39.39	34.07
CDX93379	Canola	mitochondrion	39.39	34.07
CDY33984	Canola	nucleus	37.53	34.04
CDY07789	Canola	mitochondrion	36.36	33.77
CDY15542	Canola	nucleus	42.19	33.03
CDX76691	Canola	cytosol, mitochondrion, nucleus	42.89	32.8
CDY15360	Canola	nucleus	42.66	32.8
CDY47282	Canola	nucleus	42.66	32.74
CDY10113	Canola	nucleus	42.42	32.62
CDY56450	Canola	mitochondrion	42.66	32.56
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	40.79	32.53
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	40.79	32.11
CDX86576	Canola	nucleus	41.96	32.09
CDX78819	Canola	nucleus	26.81	31.94
CDY60962	Canola	cytosol, golgi, nucleus	42.89	31.67
CDY05076	Canola	mitochondrion	40.79	30.43
CDX90734	Canola	mitochondrion	40.79	30.17
CDY31285	Canola	nucleus	38.69	30.07
CDY08822	Canola	nucleus	38.93	28.84
CDY14538	Canola	nucleus	38.93	28.79
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	56.41	27.78
CDY37949	Canola	cytosol, nucleus, plastid	39.39	27.35
CDX72820	Canola	cytosol, nucleus, plastid	40.56	27.32
CDY44496	Canola	nucleus	39.63	27.2
CDX68304	Canola	cytosol, nucleus, plastid	39.86	26.89
CDX96338	Canola	plastid	40.79	26.88
CDY03700	Canola	cytosol, nucleus, plastid	39.86	26.47
CDX90428	Canola	nucleus	39.16	26.25
CDY68359	Canola	nucleus	27.97	22.64
CDY53816	Canola	cytosol	10.96	19.42

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	GO:A0A078FMX0	UniProt:A0A078FMX0	EnsemblPlants:CDY15795	ProteinID:CDY15795
ProteinID:CDY15795.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSBRNA2T00090100001
InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF63	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI0004EE475E	:	:	:	:

Description

BnaC02g34140DBnaC02g34140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMX0]

Coordinates

chrLK032058:+:129499..132764

Molecular Weight (calculated)

49173.6 Da

IEP (calculated)

7.935

GRAVY (calculated)

-0.458

Length

429 amino acids

Sequence
(BLAST)

001: MLGSYKEVMW PRLVANKILR KSVGSNNFVA DFPPDADEQL LETPGLVDER PPFDSKSIFV NQHKTTNLNY KVLVSTWNVG GIVPEDGFDM EDLLETHKTP
101: CDIYVLGFQE VVPLRASNVL GSDNNKVSAK WNSLIRETLN KSVATSDDRD KRINAVSQDF KCIISKQMVG ILITVWVQGG LRPYIRDPSV SCVGCGVMGC
201: LGNKGSVSVR FRLHETSFCF VCSHLASGGR DRDGRQRNSD VIEILSRSTF PRGTYLEDLP KKILDHDRVI FLGDLNYRIS LPEEKTRLLV ERKEWKTLLE
301: NDQLSMEIMN GQNFRGWQEG NVTFAPTYKY IPNSDLYYGC IAYKKDEKKR APAWCDRIIW YGNGLKQHEY TRGEVKISDH RPVKAIFTAE VKVLRYSNKI
401: RDLFFSERFE DRIDGYDQID SKDYSWIST

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.