CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78819	Canola	nucleus	54.56	94.72
CDX90428	Canola	nucleus	88.8	86.72
CDY68359	Canola	nucleus	72.16	85.09
AT4G18010.1	Thale cress	nucleus	86.88	84.06
KRG89576	Soybean	cytosol	10.88	60.71
KRH37570	Soybean	cytosol	10.88	60.71
GSMUA_Achr9P23430_001	Banana	mitochondrion	45.28	60.21
KRH77232	Soybean	cytosol	54.56	59.62
KRH28263	Soybean	cytosol	59.52	59.05
KRH04304	Soybean	cytosol, mitochondrion, nucleus	59.04	58.66
KRH57586	Soybean	nucleus	58.24	58.33
VIT_02s0012g00550.t01	Wine grape	mitochondrion	57.92	57.64
GSMUA_Achr3P27520_001	Banana	mitochondrion	46.08	57.26
PGSC0003DMT400052816	Potato	mitochondrion	56.16	56.7
Solyc08g007080.2.1	Tomato	cytosol, mitochondrion, nucleus	55.68	56.22
PGSC0003DMT400062236	Potato	mitochondrion	54.88	54.44
Solyc08g077210.2.1	Tomato	mitochondrion	54.72	54.29
CDY70508	Canola	cytosol	25.76	47.77
CDY53817	Canola	nucleus	21.92	42.02
CDX79733	Canola	nucleus	28.8	40.91
CDY28392	Canola	cytosol, golgi, mitochondrion, plastid	34.72	39.82
CDX91363	Canola	mitochondrion	30.4	39.75
CDY09402	Canola	mitochondrion	27.2	39.63
CDY15795	Canola	mitochondrion	27.2	39.63
CDY53820	Canola	mitochondrion	18.4	39.52
CDX73292	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	33.76	39.22
CDY56450	Canola	mitochondrion	34.88	38.79
CDY18445	Canola	mitochondrion	30.56	38.51
CDX76691	Canola	cytosol, mitochondrion, nucleus	34.56	38.5
CDX74960	Canola	mitochondrion	30.72	38.48
CDX93379	Canola	mitochondrion	30.24	38.1
CDX90734	Canola	mitochondrion	35.36	38.1
CDY05076	Canola	mitochondrion	35.04	38.09
CDY07789	Canola	mitochondrion	28.0	37.88
CDY15360	Canola	nucleus	33.44	37.46
CDY15542	Canola	nucleus	32.16	36.68
CDY10113	Canola	nucleus	32.32	36.2
CDY14134	Canola	plastid	27.36	36.15
CDX80935	Canola	nucleus	27.2	36.02
CDX86576	Canola	nucleus	32.32	36.01
CDY60962	Canola	cytosol, golgi, nucleus	33.44	35.97
CDY47282	Canola	nucleus	32.16	35.96
Zm00001d019672_P002	Maize	cytosol	28.64	35.87
CDY04934	Canola	nucleus	27.04	35.73
CDY33984	Canola	nucleus	26.4	34.88
CDX72820	Canola	cytosol, nucleus, plastid	35.36	34.69
CDX96338	Canola	plastid	35.68	34.26
CDY37949	Canola	cytosol, nucleus, plastid	33.76	34.14
CDX68304	Canola	cytosol, nucleus, plastid	34.56	33.96
CDY03700	Canola	cytosol, nucleus, plastid	33.76	32.66
CDY31285	Canola	nucleus	27.68	31.34
CDY08822	Canola	nucleus	28.32	30.57
CDY14538	Canola	nucleus	28.32	30.52
CDY53816	Canola	cytosol	11.68	30.17

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	GO:A0A078I3S9	UniProt:A0A078I3S9	EnsemblPlants:CDY44496	ProteinID:CDY44496
ProteinID:CDY44496.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSBRNA2T00080254001
InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF236	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI0004EE3096	SEG:seg	:	:	:

Description

BnaC01g10530DBnaC01g10530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3S9]

Coordinates

chrLK032592:+:68624..71542

Molecular Weight (calculated)

71262.9 Da

IEP (calculated)

7.920

GRAVY (calculated)

-0.697

Length

625 amino acids

Sequence
(BLAST)

001: MKARRGRRPE KFWPSIVMNK WLNIKPKVND FSEDEVDTET ESEDDVCSVK DIADSCCVTD HCNKISGKDS FSAQRNKYIY GTVRKHRRGK SETLRAQYIN
101: TKDIKVTVAT WNVAGKRPSD DLEIDDWLTT DSPSDIYIIG FQEVVPLNAG NVLGAEDRGP IPKWESIIRR TLNKSEKESF YDQSSPSNTN VLHRSHSAPS
201: SPVLGQQTNS IIADVMVENL ASDQSLDLAT DEFIDAATAL PSLEPVGNPD VDWPERALDE NPQIVGSEGK LRRVLSSNAM LGFKLPENPT GVSRFSLDAR
301: NLKRSRSFET LKLSWNDIKE ENDNNSSSSS EELSSDEEKG DKIGNTYGLP EDVVEECRKV KDSQKYVRIV SKQMVGIYVS VWIRRRLRRH VNNLKVSPVG
401: VGLMGYMGNK GSVSISMTLY QSRMCFVCSH LTSGQKDGAE QRRNADVYEI IRRTRFASVL DTDQPRTIPC HDQVFWFGDL NYRLNMSDSE VRKLVSQKRW
501: DELKNSDQLI RELRRGHVFD GWREGPIKFP PTYKYEFDSD RYAGENVREG EKKRAPAWCD RILWLGKGIR QECYKRSEIR MSDHRPVTSI FNVGVEVFNQ
601: RKLQRALHVN NAAASAVHPE PSFLF

Best Arabidopsis Sequence Match ( AT4G18010.1 )
(BLAST)

001: MKTRRGKRPE RFWPSIVMNK WLNRKPKVYD FSEDEIDTEP ESEDDVCSVK DVPNVHCVTD EDSHNGRRGS EADHGNNISD GGVSVRGGYQ RKHRRGKSET
101: LRAQYINTKD IKVTVATWNV AGKRPSDDLE IEDWLSTDNP SDIYIIGFQE VVPLNAGNVF GAEDRGPIPK WESIIRRTLN KSNKESVYDQ SPSCNNNALH
201: RSHSAPSSPI LAQEANSIIS HVMVENLVAD HSLDLATNEF IDAATALPSL EPQRNPNMDW PELALDSNPQ IVGSEGKLRR VFSSNATLGF KLPENPSGAS
301: RFASEARQLK RSRSFETLNL SWNDIKEEID NRSSSSSEAE EAAKIMHDDS SDGDSSSQDE EDGDKIRNSY GLPEDLVEEC RKVKDSQKYV RIVSKQMVGI
401: YVSVWIRRRL RRHVNNLKVS PVGVGLMGYM GNKGSVSISM TLYQSRMCFV CSHLTSGHKD GAEQRRNADV YEIIRRTRFA SVLDTDQPRT IPCHDQVFWF
501: GDLNYRLNMS DGEVRKLVSQ KRWDELKNSD QLIRELRRGH VFDGWREGPI KFPPTYKYEF DSDRYAGENL REPEKKRAPA WCDRILWLGK GIRQECYKRS
601: EIRMSDHRPV TSIFNVGVEV FDHRKLQRAL HVNNAAASAV HPEPSF

Arabidopsis Description

IP5P2Type I inositol polyphosphate 5-phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.