Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07789 | Canola | mitochondrion | 86.82 | 82.68 |
| AT2G37440.1 | Thale cress | mitochondrion | 84.09 | 77.24 |
| CDX91363 | Canola | mitochondrion | 83.64 | 76.99 |
| CDX74960 | Canola | mitochondrion | 87.05 | 76.75 |
| CDY18445 | Canola | mitochondrion | 85.91 | 76.21 |
| CDX93379 | Canola | mitochondrion | 84.09 | 74.6 |
| CDY70508 | Canola | cytosol | 42.5 | 55.49 |
| KRH32331 | Soybean | mitochondrion | 57.05 | 54.21 |
| KRH19738 | Soybean | nucleus | 57.5 | 54.18 |
| VIT_08s0040g02520.t01 | Wine grape | cytosol | 58.86 | 53.51 |
| Solyc09g005690.2.1 | Tomato | cytosol | 50.23 | 52.25 |
| KRG95832 | Soybean | nucleus | 55.68 | 52.13 |
| KRH67562 | Soybean | nucleus | 57.5 | 51.32 |
| PGSC0003DMT400061482 | Potato | nucleus | 54.09 | 51.18 |
| Os05t0114100-00 | Rice | cytosol, nucleus | 47.95 | 48.62 |
| GSMUA_Achr5P28560_001 | Banana | nucleus | 54.77 | 44.14 |
| CDY04934 | Canola | nucleus | 43.86 | 40.8 |
| CDY33984 | Canola | nucleus | 43.86 | 40.8 |
| CDY14134 | Canola | plastid | 43.86 | 40.8 |
| CDX80935 | Canola | nucleus | 42.95 | 40.04 |
| GSMUA_Achr8P02080_001 | Banana | mitochondrion | 50.0 | 38.94 |
| CDY15360 | Canola | nucleus | 48.86 | 38.53 |
| TraesCSU01G006000.2 | Wheat | plastid | 50.23 | 38.5 |
| EES18903 | Sorghum | nucleus | 47.5 | 38.49 |
| Zm00001d035612_P001 | Maize | mitochondrion | 45.91 | 38.48 |
| CDY15542 | Canola | nucleus | 47.5 | 38.14 |
| Zm00001d035614_P001 | Maize | mitochondrion | 45.23 | 38.05 |
| CDY53817 | Canola | nucleus | 28.18 | 38.04 |
| TraesCS1B01G052100.1 | Wheat | plastid | 50.45 | 37.63 |
| CDX86576 | Canola | nucleus | 47.95 | 37.61 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 47.95 | 37.61 |
| CDY56450 | Canola | mitochondrion | 47.95 | 37.54 |
| CDY09402 | Canola | mitochondrion | 36.59 | 37.53 |
| GSMUA_Achr6P15360_001 | Banana | nucleus | 50.91 | 37.33 |
| CDY10113 | Canola | nucleus | 47.27 | 37.28 |
| CDY47282 | Canola | nucleus | 47.27 | 37.21 |
| TraesCS1A01G039300.1 | Wheat | plastid | 50.23 | 37.21 |
| CDY60962 | Canola | cytosol, golgi, nucleus | 49.09 | 37.18 |
| CDY15795 | Canola | mitochondrion | 36.14 | 37.06 |
| CDX78819 | Canola | nucleus | 29.09 | 35.56 |
| CDY31285 | Canola | nucleus | 43.86 | 34.96 |
| CDY53820 | Canola | mitochondrion | 22.73 | 34.36 |
| CDY08822 | Canola | nucleus | 43.64 | 33.16 |
| CDY14538 | Canola | nucleus | 43.64 | 33.1 |
| CDX73292 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 38.41 | 31.41 |
| CDY28392 | Canola | cytosol, golgi, mitochondrion, plastid | 38.86 | 31.38 |
| CDY05076 | Canola | mitochondrion | 40.0 | 30.61 |
| CDX90734 | Canola | mitochondrion | 40.0 | 30.34 |
| CDY44496 | Canola | nucleus | 40.91 | 28.8 |
| CDX90428 | Canola | nucleus | 41.14 | 28.28 |
| CDX68304 | Canola | cytosol, nucleus, plastid | 40.0 | 27.67 |
| CDX72820 | Canola | cytosol, nucleus, plastid | 39.77 | 27.47 |
| CDX96338 | Canola | plastid | 40.0 | 27.04 |
| CDY37949 | Canola | cytosol, nucleus, plastid | 36.14 | 25.73 |
| CDY68359 | Canola | nucleus | 30.45 | 25.28 |
| CDY03700 | Canola | cytosol, nucleus, plastid | 35.91 | 24.46 |
| CDY53816 | Canola | cytosol | 11.14 | 20.25 |
Protein Annotations
| EnsemblPlants:CDX79733 | EnsemblPlantsGene:GSBRNA2T00132553001 | Gene3D:3.60.10.10 | GO:A0A078CX66 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0046856 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | InterPro:IPPc |
| InterPro:IPR036691 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF115 | PFAM:PF03372 | ProteinID:CDX79733 | ProteinID:CDX79733.1 |
| SMART:SM00128 | SUPFAM:SSF56219 | UniParc:UPI0004EF337B | MapMan:27.5.4.1 | : | : |
Description
BnaC03g20690D
Coordinates
chrLK031818:+:1997873..1999719
Molecular Weight (calculated)
50213.9 Da
IEP (calculated)
8.761
GRAVY (calculated)
-0.497
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEIGWLGQA NGDLRQSMLG EHVARVDDKL NLKMFVGTWN VGGKPPHDGL DLKDWLKSPA DTDIYVLGFQ EIVPLNAGNV LGAEDNGPAA KWLSLIREAL
101: NNNINNISQK DLELSINHRT FLELAKSSQQ PRHSFSSLPD DNRFACNSTP IRGYSLAASK QMVGIFLCVW IRDDLRKRIT NLKVSCVGRG IMGYLGNKGS
201: ISISMSLHET SLCFVCTHLT SGEREGDEIR RNLDVTEIIK RTRFSCSSKD SQPESIMDHD KVIWLGDLNY RLRASSDVHE QLKNHDWEAL LEKDQLKIEQ
301: RAGRVFHGWE EGKIYFAPTY KYLINSDNYV VQTEKSKERR RTPAWCDRIL WKGDGMKQIW YTRAESRFSD HRPVQSLFSF HIDLTQNQSN RKTRLIHQNH
401: RPNPVLPYTC HGKVQAEVIL LLTRAQSCIV TQPRLISSAS
101: NNNINNISQK DLELSINHRT FLELAKSSQQ PRHSFSSLPD DNRFACNSTP IRGYSLAASK QMVGIFLCVW IRDDLRKRIT NLKVSCVGRG IMGYLGNKGS
201: ISISMSLHET SLCFVCTHLT SGEREGDEIR RNLDVTEIIK RTRFSCSSKD SQPESIMDHD KVIWLGDLNY RLRASSDVHE QLKNHDWEAL LEKDQLKIEQ
301: RAGRVFHGWE EGKIYFAPTY KYLINSDNYV VQTEKSKERR RTPAWCDRIL WKGDGMKQIW YTRAESRFSD HRPVQSLFSF HIDLTQNQSN RKTRLIHQNH
401: RPNPVLPYTC HGKVQAEVIL LLTRAQSCIV TQPRLISSAS
001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS
Arabidopsis Description
IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.