Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10113 | Canola | nucleus | 96.78 | 96.95 |
| Bra015428.1-P | Field mustard | nucleus | 96.96 | 92.97 |
| CDY15542 | Canola | nucleus | 89.45 | 91.24 |
| CDX86576 | Canola | nucleus | 90.7 | 90.37 |
| AT1G05470.2 | Thale cress | nucleus | 93.38 | 84.6 |
| CDY15360 | Canola | nucleus | 83.18 | 83.33 |
| CDY60962 | Canola | cytosol, golgi, nucleus | 83.9 | 80.72 |
| VIT_05s0020g03770.t01 | Wine grape | cytosol, mitochondrion, nucleus | 75.13 | 74.07 |
| KRG91335 | Soybean | nucleus | 76.39 | 73.88 |
| KRH35494 | Soybean | nucleus | 76.39 | 72.74 |
| KRH77819 | Soybean | nucleus | 74.96 | 72.37 |
| KRH27671 | Soybean | nucleus | 74.42 | 71.85 |
| KRH32792 | Soybean | cytosol | 33.99 | 71.7 |
| VIT_07s0151g00590.t01 | Wine grape | nucleus | 69.41 | 69.53 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 57.78 | 66.19 |
| KRH32041 | Soybean | nucleus | 65.83 | 65.83 |
| GSMUA_Achr2P08860_001 | Banana | cytosol | 50.27 | 65.2 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 57.42 | 64.85 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 54.74 | 64.56 |
| KRH71395 | Soybean | nucleus | 64.58 | 64.46 |
| KRG95566 | Soybean | nucleus | 64.4 | 64.4 |
| Solyc09g065480.1.1 | Tomato | nucleus | 64.04 | 63.93 |
| KRH67243 | Soybean | nucleus | 63.69 | 63.91 |
| PGSC0003DMT400049726 | Potato | nucleus | 63.86 | 63.75 |
| Solyc09g082370.2.1 | Tomato | nucleus | 71.02 | 63.62 |
| PGSC0003DMT400082071 | Potato | nucleus | 71.02 | 63.62 |
| PGSC0003DMT400042059 | Potato | nucleus | 66.73 | 62.58 |
| Solyc06g054010.2.1 | Tomato | nucleus | 65.3 | 61.55 |
| GSMUA_Achr8P26780_001 | Banana | endoplasmic reticulum | 55.64 | 61.46 |
| Os03t0793600-00 | Rice | nucleus | 61.72 | 61.06 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 55.99 | 60.89 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 55.1 | 60.87 |
| GSMUA_Achr3P14960_001 | Banana | nucleus | 57.42 | 60.68 |
| Os07t0175900-01 | Rice | cytosol | 61.72 | 60.53 |
| GSMUA_Achr7P25790_001 | Banana | nucleus | 54.56 | 60.28 |
| EER98050 | Sorghum | cytosol | 61.18 | 60.11 |
| KXG37885 | Sorghum | nucleus | 59.39 | 59.71 |
| EER92819 | Sorghum | cytosol, mitochondrion, nucleus | 61.72 | 59.59 |
| EER93309 | Sorghum | nucleus | 60.11 | 59.57 |
| Os03t0160600-01 | Rice | mitochondrion | 61.36 | 59.55 |
| Zm00001d033451_P004 | Maize | nucleus | 59.39 | 59.39 |
| TraesCS4D01G275200.1 | Wheat | nucleus | 61.72 | 59.38 |
| Zm00001d048434_P001 | Maize | mitochondrion | 61.72 | 59.38 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 59.75 | 59.22 |
| TraesCS4D01G015900.2 | Wheat | nucleus | 59.57 | 59.04 |
| TraesCS5B01G434000.1 | Wheat | nucleus | 59.57 | 58.94 |
| Zm00001d013090_P002 | Maize | nucleus | 59.75 | 58.91 |
| TraesCS4B01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 61.54 | 58.9 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 61.36 | 58.83 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 59.39 | 58.76 |
| TraesCS4B01G017400.1 | Wheat | nucleus | 59.21 | 58.69 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 61.0 | 58.59 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 59.21 | 58.58 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 59.03 | 58.3 |
| CDY56450 | Canola | mitochondrion | 58.5 | 58.19 |
| Zm00001d013603_P006 | Maize | nucleus | 59.21 | 58.07 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 58.14 | 57.93 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 60.47 | 57.29 |
| Zm00001d034410_P001 | Maize | plastid | 59.21 | 57.27 |
| CDY70508 | Canola | cytosol | 34.35 | 56.97 |
| HORVU5Hr1G104620.10 | Barley | nucleus | 60.11 | 56.09 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 57.42 | 55.92 |
| EER91601 | Sorghum | nucleus | 58.68 | 55.78 |
| Zm00001d032935_P006 | Maize | nucleus | 58.86 | 55.67 |
| Zm00001d018929_P002 | Maize | cytosol | 60.11 | 55.63 |
| CDX79733 | Canola | nucleus | 37.21 | 47.27 |
| CDX91363 | Canola | mitochondrion | 40.25 | 47.07 |
| Os03t0663700-01 | Rice | nucleus | 23.97 | 46.05 |
| CDY18445 | Canola | mitochondrion | 40.79 | 45.97 |
| CDX74960 | Canola | mitochondrion | 40.79 | 45.69 |
| CDX93379 | Canola | mitochondrion | 40.25 | 45.36 |
| CDY53817 | Canola | nucleus | 26.12 | 44.79 |
| CDY07789 | Canola | mitochondrion | 36.67 | 44.37 |
| CDY04934 | Canola | nucleus | 37.21 | 43.97 |
| CDY14134 | Canola | plastid | 37.21 | 43.97 |
| CDY33984 | Canola | nucleus | 37.03 | 43.76 |
| CDX80935 | Canola | nucleus | 36.85 | 43.64 |
| CDY15795 | Canola | mitochondrion | 32.74 | 42.66 |
| CDY09402 | Canola | mitochondrion | 32.2 | 41.96 |
| CDY53820 | Canola | mitochondrion | 21.11 | 40.55 |
| CDX78819 | Canola | nucleus | 25.04 | 38.89 |
| CDY31285 | Canola | nucleus | 38.28 | 38.77 |
| CDY08822 | Canola | nucleus | 39.53 | 38.17 |
| CDY14538 | Canola | nucleus | 39.53 | 38.1 |
| CDY28392 | Canola | cytosol, golgi, mitochondrion, plastid | 37.03 | 37.98 |
| CDX73292 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 36.49 | 37.92 |
| CDY05076 | Canola | mitochondrion | 36.31 | 35.3 |
| CDX90734 | Canola | mitochondrion | 36.49 | 35.17 |
| CDX68304 | Canola | cytosol, nucleus, plastid | 37.21 | 32.7 |
| CDX72820 | Canola | cytosol, nucleus, plastid | 37.21 | 32.65 |
| CDX96338 | Canola | plastid | 37.57 | 32.26 |
| CDY44496 | Canola | nucleus | 35.96 | 32.16 |
| CDX90428 | Canola | nucleus | 36.49 | 31.88 |
| CDY37949 | Canola | cytosol, nucleus, plastid | 33.81 | 30.58 |
| CDY03700 | Canola | cytosol, nucleus, plastid | 34.17 | 29.57 |
| CDY68359 | Canola | nucleus | 26.65 | 28.11 |
| CDY53816 | Canola | cytosol | 11.27 | 26.03 |
Protein Annotations
| MapMan:27.5.4.1 | Gene3D:3.60.10.10 | GO:A0A078IAV2 | UniProt:A0A078IAV2 | EnsemblPlants:CDY47282 | ProteinID:CDY47282 |
| ProteinID:CDY47282.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | EnsemblPlantsGene:GSBRNA2T00087092001 |
| InterPro:IPPc | InterPro:IPR036691 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF159 | SMART:SM00128 |
| SUPFAM:SSF56219 | UniParc:UPI0004EEDCDA | : | : | : | : |
Description
BnaA10g03640DBnaA10g03640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAV2]
Coordinates
chrLK032705:+:121617..125253
Molecular Weight (calculated)
63531.8 Da
IEP (calculated)
9.597
GRAVY (calculated)
-0.702
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MREDKSKTNK LAWSKKMVRK WFNIKSKTEE FQTDVPAPSA SNGIEVEHRS SFSVEKAPTT INKSKTEKLS KNWEQQARQR RMNYENPRII DVQNYSIFTA
101: TWNVAGRSPP PDLNLDEWLH SSAPADIYVL GFQEIVPLNA GNVLGSEDNG PAQKWLSLIR KTLNNRPGAS GGGAYHTPSP LPVPMAELDA DFSGSTRQKN
201: STFFHRRSFQ TPSSACNDPS IPQPGRFSVC DRVFFSQRPS DFDPSFRGGS SSHRPNDDNG TGDSPSTVLY SPGSAAANES GYRIPWNSSQ YCLVASKQMV
301: GVFLTIWVKS ELREHVKNMK VSCVGRGLMG YLGNKGSISI SMLLHQTSFC FVCTHLTSGQ KEGDELKRNS DVMEILKKTR FPRVKSLEEE KSPENILQHD
401: RVIWLGDLNY RIALTYRSAK ALVEMQNWRA LLENDQLRIE QKRGHVFKGW NEGKIYFPPT YKYSRNSDRY SGDDLHPKEK RRTPAWCDRI LWYGEGLHQL
501: SYVRGESKFS DHRPVYGIFC AEVESAHNKL KRTMSCSASR VQAEELLPYS RGYTELSFF
101: TWNVAGRSPP PDLNLDEWLH SSAPADIYVL GFQEIVPLNA GNVLGSEDNG PAQKWLSLIR KTLNNRPGAS GGGAYHTPSP LPVPMAELDA DFSGSTRQKN
201: STFFHRRSFQ TPSSACNDPS IPQPGRFSVC DRVFFSQRPS DFDPSFRGGS SSHRPNDDNG TGDSPSTVLY SPGSAAANES GYRIPWNSSQ YCLVASKQMV
301: GVFLTIWVKS ELREHVKNMK VSCVGRGLMG YLGNKGSISI SMLLHQTSFC FVCTHLTSGQ KEGDELKRNS DVMEILKKTR FPRVKSLEEE KSPENILQHD
401: RVIWLGDLNY RIALTYRSAK ALVEMQNWRA LLENDQLRIE QKRGHVFKGW NEGKIYFPPT YKYSRNSDRY SGDDLHPKEK RRTPAWCDRI LWYGEGLHQL
501: SYVRGESKFS DHRPVYGIFC AEVESAHNKL KRTMSCSASR VQAEELLPYS RGYTELSFF
001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
Arabidopsis Description
IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.