Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g082370.2.1 | Tomato | nucleus | 99.2 | 99.2 |
| PGSC0003DMT400042059 | Potato | nucleus | 78.21 | 81.88 |
| VIT_05s0020g03770.t01 | Wine grape | cytosol, mitochondrion, nucleus | 74.2 | 81.66 |
| KRH32792 | Soybean | cytosol | 33.65 | 79.25 |
| KRH77819 | Soybean | nucleus | 72.44 | 78.07 |
| KRH27671 | Soybean | nucleus | 72.12 | 77.72 |
| KRH35494 | Soybean | nucleus | 72.76 | 77.34 |
| KRG91335 | Soybean | nucleus | 71.63 | 77.34 |
| AT2G32010.3 | Thale cress | nucleus | 70.51 | 74.07 |
| CDY15360 | Canola | nucleus | 65.38 | 73.12 |
| CDY15542 | Canola | nucleus | 63.94 | 72.81 |
| Bra021766.1-P | Field mustard | nucleus | 67.31 | 72.79 |
| AT1G05470.2 | Thale cress | nucleus | 71.15 | 71.96 |
| Bra015428.1-P | Field mustard | nucleus | 66.99 | 71.7 |
| CDX86576 | Canola | nucleus | 64.42 | 71.66 |
| CDY47282 | Canola | nucleus | 63.62 | 71.02 |
| CDY10113 | Canola | nucleus | 63.3 | 70.79 |
| CDY60962 | Canola | cytosol, golgi, nucleus | 65.06 | 69.88 |
| Bra030611.1-P | Field mustard | nucleus | 69.71 | 69.71 |
| GSMUA_Achr7P01420_001 | Banana | nucleus | 55.13 | 69.49 |
| GSMUA_Achr4P21240_001 | Banana | cytosol | 52.4 | 68.99 |
| GSMUA_Achr2P08860_001 | Banana | cytosol | 47.6 | 68.91 |
| PGSC0003DMT400049726 | Potato | nucleus | 61.7 | 68.75 |
| GSMUA_Achr5P02940_001 | Banana | nucleus | 52.88 | 67.62 |
| GSMUA_Achr8P26780_001 | Banana | endoplasmic reticulum | 53.53 | 66.01 |
| Os03t0793600-00 | Rice | nucleus | 59.46 | 65.66 |
| GSMUA_Achr7P07740_001 | Banana | cytosol | 52.72 | 65.02 |
| EER93309 | Sorghum | nucleus | 58.65 | 64.89 |
| Zm00001d048434_P001 | Maize | mitochondrion | 60.42 | 64.89 |
| GSMUA_Achr3P14960_001 | Banana | nucleus | 54.97 | 64.84 |
| GSMUA_Achr7P25790_001 | Banana | nucleus | 52.4 | 64.62 |
| EER92819 | Sorghum | cytosol, mitochondrion, nucleus | 59.94 | 64.59 |
| GSMUA_Achr2P17460_001 | Banana | nucleus | 53.21 | 64.59 |
| Os03t0160600-01 | Rice | mitochondrion | 59.62 | 64.58 |
| AT3G63240.2 | Thale cress | nucleus | 56.57 | 64.53 |
| Os07t0175900-01 | Rice | cytosol | 58.65 | 64.21 |
| Zm00001d013090_P002 | Maize | nucleus | 58.33 | 64.2 |
| TraesCS4D01G015900.2 | Wheat | nucleus | 57.69 | 63.83 |
| TraesCS4A01G296200.1 | Wheat | nucleus | 57.69 | 63.83 |
| EER98050 | Sorghum | cytosol | 58.17 | 63.8 |
| TraesCS5A01G432000.1 | Wheat | nucleus | 57.53 | 63.54 |
| TraesCS5D01G439900.1 | Wheat | nucleus | 57.53 | 63.54 |
| KXG37885 | Sorghum | nucleus | 56.57 | 63.49 |
| TraesCS4B01G017400.1 | Wheat | nucleus | 57.37 | 63.48 |
| TraesCS5B01G434000.1 | Wheat | nucleus | 57.21 | 63.19 |
| TraesCS4D01G275200.1 | Wheat | nucleus | 58.65 | 62.99 |
| Os10t0422500-01 | Rice | cytosol, mitochondrion, nucleus | 59.46 | 62.88 |
| Zm00001d033451_P004 | Maize | nucleus | 56.25 | 62.79 |
| HORVU4Hr1G073350.1 | Barley | cytosol, mitochondrion, nucleus | 58.49 | 62.71 |
| TraesCS4B01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 58.49 | 62.5 |
| TraesCS4A01G029300.1 | Wheat | cytosol, mitochondrion, nucleus | 58.33 | 62.44 |
| HORVU4Hr1G002820.15 | Barley | nucleus | 56.57 | 62.37 |
| Zm00001d034410_P001 | Maize | plastid | 57.69 | 62.28 |
| Zm00001d013603_P006 | Maize | nucleus | 56.89 | 62.28 |
| TraesCS6A01G225700.2 | Wheat | nucleus | 56.89 | 61.85 |
| CDY56450 | Canola | mitochondrion | 54.81 | 60.85 |
| CDX76691 | Canola | cytosol, mitochondrion, nucleus | 54.65 | 60.78 |
| Bra007737.1-P | Field mustard | mitochondrion | 55.45 | 60.49 |
| EER91601 | Sorghum | nucleus | 56.89 | 60.37 |
| HORVU5Hr1G104620.10 | Barley | nucleus | 57.85 | 60.27 |
| Zm00001d018929_P002 | Maize | cytosol | 57.37 | 59.27 |
| Zm00001d032935_P006 | Maize | nucleus | 55.77 | 58.88 |
| Os03t0663700-01 | Rice | nucleus | 24.84 | 53.26 |
| PGSC0003DMT400058661 | Potato | plastid | 20.51 | 50.2 |
| PGSC0003DMT400061482 | Potato | nucleus | 37.02 | 49.68 |
| PGSC0003DMT400069298 | Potato | cytosol | 25.32 | 48.32 |
| PGSC0003DMT400053156 | Potato | mitochondrion | 34.29 | 46.12 |
| PGSC0003DMT400003548 | Potato | nucleus | 30.13 | 41.87 |
| PGSC0003DMT400052816 | Potato | mitochondrion | 33.33 | 33.6 |
| PGSC0003DMT400062236 | Potato | mitochondrion | 33.65 | 33.33 |
| PGSC0003DMT400064482 | Potato | cytosol, mitochondrion, nucleus, plastid | 33.97 | 31.78 |
Protein Annotations
| EntrezGene:102598229 | MapMan:27.5.4.1 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 |
| InterPro:IPPc | InterPro:IPR036691 | UniProt:M1D5K1 | EnsemblPlantsGene:PGSC0003DMG400032246 | PGSC:PGSC0003DMG400032246 | EnsemblPlants:PGSC0003DMT400082071 |
| PANTHER:PTHR11200 | PANTHER:PTHR11200:SF159 | SMART:SM00128 | SUPFAM:SSF56219 | UniParc:UPI0002960FE0 | RefSeq:XP_006360764.1 |
| SEG:seg | : | : | : | : | : |
Description
Endonuclease/exonuclease/phosphatase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400032246]
Coordinates
chr9:-:54023125..54028439
Molecular Weight (calculated)
71325.3 Da
IEP (calculated)
9.321
GRAVY (calculated)
-0.848
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDENSKKSK LSWPKKLVRK WFNIKGKTEE FQSDEVVYGG GDEWRTSISE REHCTIKKTK TEKSNSSRSM ERPRRGRADL DHPQIINVHN YSVFVATWNV
101: GGKSPSSNLN LDDWLHSAPP ADIYVLGFQE IVPLNAGNIL GAEDNGPAKK WLSLIRKTLN NGPGSSGGSS GCYTPSPVPD PIAEWNADFE GSGRRKASLF
201: PRRSFQTPQC WRMENDPSIS QPRLDRRYSV CDRVISGHRQ SDFDPNIRWG HRPSDYGHRP SDYSSGYRPS DYSSSHRPSD YSSGHRPSDY SSGHRPSDYS
301: SAHRPSDYSW GQRPSDFSRW GSSDDDYGPG DSPSTVLFSP VTGAEDGNRM PRNSRYCLVA SKQMVGIFLT VWVRSELREH VRNMKVSCVG RGLMGYLGNK
401: GSISVSMMLH QTSFCFVCTH LTSGQKEGDE LRRNADFMEI IKKTRFPRVN GVDEEKSPEN ILEHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEKD
501: QLRIEQRQGR VFVGWKEGKI YFPPTYKYSR NSDRYAGDDM HPKEKRRTPA WCDRILWHGG GLQQLSYVRG ESRFSDHRPV SSVFWAEVES VPSRLRKSMS
601: CSSSRIEVEE LLPYSHGYTE LCFF
101: GGKSPSSNLN LDDWLHSAPP ADIYVLGFQE IVPLNAGNIL GAEDNGPAKK WLSLIRKTLN NGPGSSGGSS GCYTPSPVPD PIAEWNADFE GSGRRKASLF
201: PRRSFQTPQC WRMENDPSIS QPRLDRRYSV CDRVISGHRQ SDFDPNIRWG HRPSDYGHRP SDYSSGYRPS DYSSSHRPSD YSSGHRPSDY SSGHRPSDYS
301: SAHRPSDYSW GQRPSDFSRW GSSDDDYGPG DSPSTVLFSP VTGAEDGNRM PRNSRYCLVA SKQMVGIFLT VWVRSELREH VRNMKVSCVG RGLMGYLGNK
401: GSISVSMMLH QTSFCFVCTH LTSGQKEGDE LRRNADFMEI IKKTRFPRVN GVDEEKSPEN ILEHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEKD
501: QLRIEQRQGR VFVGWKEGKI YFPPTYKYSR NSDRYAGDDM HPKEKRRTPA WCDRILWHGG GLQQLSYVRG ESRFSDHRPV SSVFWAEVES VPSRLRKSMS
601: CSSSRIEVEE LLPYSHGYTE LCFF
001: MREEKSKTNK LAWSKKMVRK WFNIKSKTEE FQADDPSSAG IEVEHRSSFS AEKAPSTIKN TKTEKLSKNW EQQARQRRMN YENPRIIDVQ NYSIFVATWN
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
101: VAGRSPPSDL NLDEWLHSSA PADIYVLGFQ EIVPLNAGNV LGAEDNGPAQ KWLSLIRKTL NNRPGTSGTS GYHTPSPIPV PMAELDADFS GSTRQKNSTF
201: FHRRSFQTPS STWNDPSIPQ PGLDRRFSVC DRVFFSHRPS DFDPSFRGSS SSHRPSDYSR RPSDYSRRPS DYSRRPSDYS RRPSDSRPSD YSRPSDYYSR
301: PSDYSRPSDF SRSSDDDNGL GDSPSTVLYS PGSAANENGY RIPWNSSQYC LVASKQMVGV FLTIWVKSEL REHVKNMKVS CVGRGLMGYL GNKGSISISM
401: LLHQTSFCFV CTHLTSGQKE GDELKRNSDV MEILKKTRFP RVKSSEEEKS PENILQHDRV IWLGDLNYRI ALSYRSAKAL VEMQNWRALL ENDQLRIEQK
501: RGHVFKGWNE GKIYFPPTYK YSRNSDRYSG DDLHPKEKRR TPAWCDRILW FGEGLHQLSY VRGESRFSDH RPVYGIFCAE VESAHNRIKR TTSYSASRVQ
601: AEELLPYSRG YTELSFF
Arabidopsis Description
IP5P6CVP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.