Factsheet for Bra026626.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09402	Canola	mitochondrion	100.0	100.0
AT2G01900.3	Thale cress	mitochondrion	83.45	84.24
PGSC0003DMT400058661	Potato	plastid	39.63	66.67
Solyc01g005090.2.1	Tomato	nucleus	53.38	65.62
VIT_01s0011g06310.t01	Wine grape	mitochondrion	62.0	60.59
KRH58596	Soybean	mitochondrion	59.44	58.62
KRH40911	Soybean	cytosol	60.37	57.3
KRG89097	Soybean	cytosol	60.14	57.08
GSMUA_Achr9P15810_001	Banana	cytosol	44.29	56.72
KRH66073	Soybean	plastid	59.44	56.67
KRH42503	Soybean	cytosol	58.51	56.66
GSMUA_Achr7P11300_001	Banana	mitochondrion	50.12	54.16
GSMUA_Achr3P07600_001	Banana	golgi, plasma membrane	45.92	53.83
Zm00001d028366_P001	Maize	cytosol	55.71	52.53
TraesCS4A01G073900.1	Wheat	cytosol	56.88	52.47
TraesCS4B01G230100.1	Wheat	cytosol	56.64	52.37
TraesCS4D01G231500.1	Wheat	cytosol	56.64	52.26
GSMUA_Achr7P02400_001	Banana	endoplasmic reticulum, golgi, plastid	47.79	52.16
KRH16316	Soybean	cytosol	14.22	50.83
Bra005834.1-P	Field mustard	endoplasmic reticulum	29.14	50.0
GSMUA_Achr10P...	Banana	mitochondrion	51.05	50.0
KXG39809	Sorghum	nucleus	57.81	49.9
Zm00001d020378_P001	Maize	cytosol, mitochondrion, nucleus, plastid	46.62	49.51
Os09t0394600-01	Rice	mitochondrion	46.15	49.38
Os03t0238300-01	Rice	cytosol	56.88	49.29
Zm00001d032253_P003	Maize	cytosol	38.93	48.69
TraesCS5B01G201300.1	Wheat	cytosol	47.32	47.76
OQU89459	Sorghum	cytosol	47.55	47.66
Zm00001d047972_P001	Maize	mitochondrion	56.18	46.98
HORVU4Hr1G064440.3	Barley	cytosol, nucleus	56.64	45.59
EES15005	Sorghum	cytosol	41.96	44.01
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	45.45	43.82
EES15004	Sorghum	mitochondrion	40.56	43.61
Os08t0425500-01	Rice	cytosol	41.26	42.75
TraesCS5D01G209200.2	Wheat	cytosol, peroxisome, plasma membrane	45.45	40.97
Bra005195.1-P	Field mustard	nucleus	38.23	40.29
Bra028775.1-P	Field mustard	nucleus	38.93	35.16
Bra031881.1-P	Field mustard	cytosol	37.76	34.84
Bra017187.1-P	Field mustard	mitochondrion	39.39	34.14
Bra000001.1-P	Field mustard	mitochondrion	40.09	34.13
Bra007737.1-P	Field mustard	mitochondrion	42.89	32.17
Bra034444.1-P	Field mustard	cytosol, golgi, mitochondrion, plastid	40.56	31.93
Bra021766.1-P	Field mustard	nucleus	41.96	31.2
Bra015428.1-P	Field mustard	nucleus	41.49	30.53
Bra000691.1-P	Field mustard	mitochondrion	40.56	29.19
Bra030611.1-P	Field mustard	nucleus	41.49	28.53
Bra024353.1-P	Field mustard	nucleus	38.93	28.21
GSMUA_Achr6P11400_001	Banana	cytosol, nucleus, peroxisome	56.41	27.78
Bra012624.1-P	Field mustard	nucleus	38.0	26.16
Bra013275.1-P	Field mustard	nucleus	38.0	26.0
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	40.09	25.98
Bra016124.1-P	Field mustard	plastid	40.33	25.67
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	40.79	25.04

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EnsemblPlantsGene:Bra026626	EnsemblPlants:Bra026626.1	EnsemblPlants:Bra026626.1-P	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004439	GO:GO:0006629	GO:GO:0006810
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0034485	GO:GO:0034595	GO:GO:0046856	GO:GO:0071472	GO:GO:2000369
GO:GO:2000377	InterPro:IPPc	InterPro:IPR036691	UniProt:M4ECW6	PFAM:PF03372	PANTHER:PTHR11200
PANTHER:PTHR11200:SF63	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0002546A91	:	:

Description

AT2G01900 (E=6e-205) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA02:-:20853416..20856358

Molecular Weight (calculated)

49142.6 Da

IEP (calculated)

7.714

GRAVY (calculated)

-0.446

Length

429 amino acids

Sequence
(BLAST)

001: MLGSYKEVMW PRLVANKILR KSVGSNNFVA DFPPDADELL LEAPGLVDEQ PSFDSKSIFV NQHKTTNLNY KVHVSTWNVG GIVPEDGFDM EDLLETHKTP
101: CDIYVLGFQE VVPLRASNVL GSDNNKVSAK WNSLIRETLN KSVATSDDRN KGINGVSQDF KCIISKQMVG ILITVWVRGD LRPYIRDPSV SCVGCGVMGC
201: LGNKGSVSVR FRLHETSFCF VCNHLASGGR DRDGRQRNSD VIEILSRSTF PRGTYLEDLP KKILDHDRVI FLGDLNYRIS LPEEKTRLLV ERKEWKTLLE
301: NDQLSMEIMN GQIFRGWQEG NVTFAPTYKY IPNSDLYYGC IAYKKDEKKR APAWCDRIIW YGNGLKQHEY TRGEVKISDH RPVKAIFTTE VKVLRYSNKI
401: RDLFFSERFE DRIDGYDQID SKDYSWIST

Best Arabidopsis Sequence Match ( AT2G01900.3 )
(BLAST)

001: MLGSYREVMW PRLVANKILR KSLGSNNFVA DFPPNTDQKL IEASGLADER SKSILHNQHK TTLLNYKVFV STWNVGGIVP DDGLDMEDLL ETHKTPCDIY
101: VLGFQEVVPL RASNVLGSDN NKVSTKWNSL IRDALNKRAR PHRDEDLSES KGINGISQDF RCIISKQMVG ILITVWVRGD LWPYIRYPSV SCVGCGIMGC
201: LGNKGSVSVR FQLHETTFCF VCSHLASGGR DRDERQRNSD VNEILARSSF PRGSSLDLPK KILDHDRVIF LGDLNYRISL PEEKTRLLVE SKKWNILLEN
301: DQLRMEIMNG QIFRGWQEGI VKFAPTYKYV PNSDLYYGCI TYKKDEKKRA PAWCDRIIWY GNGLKQHEYT RGETKISDHR PVKAIFTTEI TVTRRGKKIR
401: NFFFSDRFEE RIGDIDSKDY SWIST

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT2G01900]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.