Factsheet for Bra028775.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	golgi
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04934	Canola	nucleus	99.16	99.58
CDY14134	Canola	plastid	97.89	98.31
Bra005834.1-P	Field mustard	endoplasmic reticulum	51.16	97.2
AT5G04980.2	Thale cress	nucleus	91.37	93.13
VIT_13s0073g00680.t01	Wine grape	cytosol	60.0	66.13
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	48.84	58.88
Bra031881.1-P	Field mustard	cytosol	50.95	52.04
KRH13212	Soybean	nucleus	54.95	51.68
KRH20549	Soybean	nucleus	54.95	51.48
Bra005195.1-P	Field mustard	nucleus	41.47	48.4
EES18414	Sorghum	nucleus, plastid	53.89	47.23
Zm00001d012534_P001	Maize	nucleus, plastid	54.11	47.07
OQU87743	Sorghum	plastid	54.11	46.64
Os05t0489000-01	Rice	nucleus	54.11	46.56
TraesCS1A01G305800.2	Wheat	plastid	53.47	45.93
TraesCS1B01G316500.1	Wheat	plastid	53.26	45.75
TraesCS1D01G305500.1	Wheat	mitochondrion	53.26	43.47
TraesCS3D01G331600.1	Wheat	nucleus, plastid	53.05	43.37
TraesCS3A01G338100.1	Wheat	nucleus, plastid	52.84	43.2
HORVU3Hr1G079850.4	Barley	cytosol	52.42	42.78
Os01t0814200-01	Rice	cytosol, nucleus, peroxisome	24.21	41.52
Bra024353.1-P	Field mustard	nucleus	51.16	41.05
Bra017187.1-P	Field mustard	mitochondrion	41.26	39.6
TraesCS3B01G369700.1	Wheat	nucleus	52.63	38.94
Bra026626.1-P	Field mustard	mitochondrion	35.16	38.93
Bra000001.1-P	Field mustard	mitochondrion	41.05	38.69
HORVU1Hr1G068860.1	Barley	endoplasmic reticulum, plastid	53.26	38.39
Bra021766.1-P	Field mustard	nucleus	46.53	38.3
Bra007737.1-P	Field mustard	mitochondrion	45.89	38.11
Bra015428.1-P	Field mustard	nucleus	44.0	35.85
Bra030611.1-P	Field mustard	nucleus	44.84	34.13
Bra034444.1-P	Field mustard	cytosol, golgi, mitochondrion, plastid	34.74	30.28
Zm00001d038530_P003	Maize	plastid	53.89	29.09
Bra000691.1-P	Field mustard	mitochondrion	34.95	27.85
Bra012624.1-P	Field mustard	nucleus	36.0	27.45
Bra013275.1-P	Field mustard	nucleus	35.37	26.79
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	35.58	25.53
Bra016124.1-P	Field mustard	plastid	35.37	24.93
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	35.37	24.03

Protein Annotations

MapMan:27.5.4.1	Gene3D:3.60.10.10	EnsemblPlantsGene:Bra028775	EnsemblPlants:Bra028775.1	EnsemblPlants:Bra028775.1-P	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	UniProt:M4EJ10
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF112	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI000254310D
SEG:seg	:	:	:	:	:

Description

AT5G04980 (E=5e-224) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA02:-:2112407..2114619

Molecular Weight (calculated)

53630.7 Da

IEP (calculated)

7.762

GRAVY (calculated)

-0.455

Length

475 amino acids

Sequence
(BLAST)

001: MSDPLYIFNK KSQSEIVVES LLSSSNLRSS MPTQQLQSLR VFVATWNVGG KSPHSGLDLD DLLHVHSEFD IYVLGFQEIV PLNAGNVLVL GDNEPAAKWL
101: AMINQSLNKS SASSSSSSSG GRLGPKTPSF GAGSMFFAKP SLKKISESFR TDCRRKLKIC NCSSFSEEIV KKYGRESCFR CPESLVNQTD LLCDDDEEED
201: DDEDDEDDDE DEEGGGKVAS VVSNQMMMKY GLVASKQMVG IFLTVWMRKE LIQHVTHLRI SCVTRGIMGC LGNKGCIAVS LQLYKTSFCF ICSHLASGER
301: EGDERRRNSD VIEILKNTTF PRICRTSFTR VPNRITKHDR VIWLGDLNYR IALSYTETKT LLDKNAWDTL LNKDQLKIER DAGRVFKGWH EGKIFFAPTY
401: KYSYNSDAYA GDTTKEKKNK RRTPAWCDRI LWHGDGIRQL SYVRGESRFS DHRPVCSVFV VNVEVCEGRT GARRQ

Best Arabidopsis Sequence Match ( AT5G04980.2 )
(BLAST)

001: MSDPLYIFNR SQSEIVVESL LASSNLRSSM PTQQIQSLRV FVATWNVGGK SPHSGLNLDA LLHVHSEFDV YVLGFQEIVP LNAGNVLVLG DNEPAAKWLA
101: MINQSLNKSS SSSGGRLSPK TPSFGAGSMF FAKPSLKKIS ESFRTECRRK LKICNCSTFS EDIVRKYGRE SCFRCPEGLV NQSGVLSDDE EDEDDDDDDE
201: DEDEGGGKVA SLVSNQMTMK YGLVASKQMV GIFLTVWMRK ELIQHVSHLR ISSVTRGIMG CLGNKGCIAV SLQLYKTSFC FICSHLASGE REGDERRRNL
301: DVIEILKNTS FPRICRTSFT RVPDRITKHD RVIWLGDLNY RIALSYSETK TLLDKNAWDT LLNKDQLKIE RDAGRVFKGW HEGKIFFAPT YKYSYNSDAY
401: AGDTSKEKKN KRRTPAWCDR ILWHGDGIRQ LSYVRGESRF SDHRPVCSVF VVDVEVCEGK TGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.