Factsheet for VIT_13s0073g00680.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005834.1-P	Field mustard	endoplasmic reticulum	42.69	73.6
CDY70508	Canola	cytosol	56.84	72.7
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	56.15	61.42
AT5G04980.2	Thale cress	nucleus	65.43	60.52
CDY04934	Canola	nucleus	66.13	60.25
CDX80935	Canola	nucleus	65.89	60.17
CDY14134	Canola	plastid	65.89	60.04
Bra028775.1-P	Field mustard	nucleus	66.13	60.0
KRH13212	Soybean	nucleus	61.95	52.87
KRH20549	Soybean	nucleus	62.18	52.86
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	51.04	49.44
EES18414	Sorghum	nucleus, plastid	61.02	48.52
OQU87743	Sorghum	plastid	61.48	48.09
Os05t0489000-01	Rice	nucleus	61.48	48.01
Zm00001d012534_P001	Maize	nucleus, plastid	60.09	47.44
TraesCS1A01G305800.2	Wheat	plastid	58.7	45.75
TraesCS1B01G316500.1	Wheat	plastid	58.7	45.75
VIT_00s0357g00110.t01	Wine grape	golgi	48.72	45.06
TraesCS3A01G338100.1	Wheat	nucleus, plastid	59.63	44.23
TraesCS3D01G331600.1	Wheat	nucleus, plastid	59.63	44.23
HORVU3Hr1G079850.4	Barley	cytosol	59.16	43.81
Os01t0814200-01	Rice	cytosol, nucleus, peroxisome	28.07	43.68
TraesCS1D01G305500.1	Wheat	mitochondrion	58.47	43.3
TraesCS3B01G369700.1	Wheat	nucleus	59.63	40.03
VIT_08s0040g02520.t01	Wine grape	cytosol	44.55	39.67
HORVU1Hr1G068860.1	Barley	endoplasmic reticulum, plastid	58.47	38.24
VIT_07s0151g00590.t01	Wine grape	nucleus	49.42	38.17
VIT_05s0020g03770.t01	Wine grape	cytosol, mitochondrion, nucleus	49.19	37.39
VIT_01s0011g06310.t01	Wine grape	mitochondrion	36.89	36.22
VIT_14s0066g02270.t01	Wine grape	cytosol	37.82	33.68
Zm00001d038530_P003	Maize	plastid	61.02	29.89
VIT_02s0012g00550.t01	Wine grape	mitochondrion	37.82	25.96
VIT_18s0157g00210.t01	Wine grape	plastid	39.44	23.98

Protein Annotations

EntrezGene:100262823	wikigene:100262823	MapMan:27.5.4.1	Gene3D:3.60.10.10	ProteinID:CBI24985	ProteinID:CBI24985.3
UniProt:D7T3A0	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	EMBL:FN595510	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856
InterPro:IPPc	InterPro:IPR036691	EntrezGene:LOC100262823	wikigene:LOC100262823	PFAM:PF03372	PANTHER:PTHR11200
PANTHER:PTHR11200:SF112	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI0001BE2404	ArrayExpress:VIT_13s0073g00680	EnsemblPlantsGene:VIT_13s0073g00680
EnsemblPlants:VIT_13s0073g00680.t01	RefSeq:XP_002264358	RefSeq:XP_002264358.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr13:-:14748826..14754072

Molecular Weight (calculated)

48837.1 Da

IEP (calculated)

8.426

GRAVY (calculated)

-0.458

Length

431 amino acids

Sequence
(BLAST)

001: MSNGQGVEPV RVFVATWNVG GKSPHSGLNL DDFLHVHDQA DIYVLGFQEI VPLNAGNVLV VEDNEPAARW LQLINQSLNK SPAVYVFNSP THPHDNRSVG
101: LRGLKTTATT GGSLFFPKYS LKAFSQTFRT ESGKRLKTCS CTSELERKYG KDCCFQCPKS SIRDDESSSE EDDEPNSFST ASSTKHMKYS LIACRQMVGI
201: FVTIWMKKEL VQHVSHLRIS CISRGIMGCL GNKGCISVRM TFHQTSFCFI CSHLASGEKE GDELRRNLDV IETLKNTQFP KICRTPASGV PEKILDHERV
301: IWFGDLNYRI ALSYSETRKL LEENAWDALL DKDQLKIERE AGRVFKGWQE GKIYFAPTYK YRNNSDTYAG DTTKSKTKRR TPAWCDRILW HGHGIRQLSY
401: IRGESQFSDH RPVCATFLVD VNVPHSRAEM L

Best Arabidopsis Sequence Match ( AT5G04980.2 )
(BLAST)

001: MSDPLYIFNR SQSEIVVESL LASSNLRSSM PTQQIQSLRV FVATWNVGGK SPHSGLNLDA LLHVHSEFDV YVLGFQEIVP LNAGNVLVLG DNEPAAKWLA
101: MINQSLNKSS SSSGGRLSPK TPSFGAGSMF FAKPSLKKIS ESFRTECRRK LKICNCSTFS EDIVRKYGRE SCFRCPEGLV NQSGVLSDDE EDEDDDDDDE
201: DEDEGGGKVA SLVSNQMTMK YGLVASKQMV GIFLTVWMRK ELIQHVSHLR ISSVTRGIMG CLGNKGCIAV SLQLYKTSFC FICSHLASGE REGDERRRNL
301: DVIEILKNTS FPRICRTSFT RVPDRITKHD RVIWLGDLNY RIALSYSETK TLLDKNAWDT LLNKDQLKIE RDAGRVFKGW HEGKIFFAPT YKYSYNSDAY
401: AGDTSKEKKN KRRTPAWCDR ILWHGDGIRQ LSYVRGESRF SDHRPVCSVF VVDVEVCEGK TGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.