Factsheet for Bra000001.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07789	Canola	mitochondrion	91.47	99.78
Bra005195.1-P	Field mustard	nucleus	71.63	88.7
AT2G37440.1	Thale cress	mitochondrion	82.94	87.27
Bra017187.1-P	Field mustard	mitochondrion	84.33	85.86
KRG95832	Soybean	nucleus	55.16	59.15
KRH32331	Soybean	mitochondrion	53.97	58.75
KRH19738	Soybean	nucleus	54.37	58.67
KRH67562	Soybean	nucleus	56.15	57.4
PGSC0003DMT400061482	Potato	nucleus	52.58	56.99
Bra005834.1-P	Field mustard	endoplasmic reticulum	28.17	56.8
VIT_08s0040g02520.t01	Wine grape	cytosol	53.77	55.99
Solyc09g005690.2.1	Tomato	cytosol	46.83	55.79
GSMUA_Achr5P28560_001	Banana	nucleus	52.98	48.9
Os05t0114100-00	Rice	cytosol, nucleus	41.87	48.62
EES18903	Sorghum	nucleus	46.63	43.28
TraesCSU01G006000.2	Wheat	plastid	49.01	43.03
GSMUA_Achr8P02080_001	Banana	mitochondrion	47.82	42.65
TraesCS1B01G052100.1	Wheat	plastid	49.8	42.54
TraesCS1A01G039300.1	Wheat	plastid	49.4	41.92
Bra031881.1-P	Field mustard	cytosol	38.49	41.72
Zm00001d035612_P001	Maize	mitochondrion	43.45	41.71
Bra007737.1-P	Field mustard	mitochondrion	47.22	41.61
Zm00001d035614_P001	Maize	mitochondrion	43.06	41.49
GSMUA_Achr6P15360_001	Banana	nucleus	49.21	41.33
Bra021766.1-P	Field mustard	nucleus	47.02	41.07
Bra028775.1-P	Field mustard	nucleus	38.69	41.05
Bra026626.1-P	Field mustard	mitochondrion	34.13	40.09
Bra015428.1-P	Field mustard	nucleus	44.44	38.42
Bra030611.1-P	Field mustard	nucleus	45.24	36.54
Bra024353.1-P	Field mustard	nucleus	39.88	33.95
Bra034444.1-P	Field mustard	cytosol, golgi, mitochondrion, plastid	35.91	33.21
Bra012624.1-P	Field mustard	nucleus	37.9	30.66
Bra000691.1-P	Field mustard	mitochondrion	36.11	30.54
Bra013275.1-P	Field mustard	nucleus	37.1	29.82
Bra003916.1-P	Field mustard	cytosol, nucleus, plastid	37.3	28.4
Bra016124.1-P	Field mustard	plastid	37.3	27.89
Bra007969.1-P	Field mustard	cytosol, nucleus, plastid	35.91	25.89

Protein Annotations

EnsemblPlants:Bra000001.1	EnsemblPlants:Bra000001.1-P	EnsemblPlantsGene:Bra000001	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF115	PFAM:PF03372
SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI000253FFFE	UniProt:M4C723	MapMan:27.5.4.1	:

Description

AT2G37440 (E=7e-179) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA03:+:8774511..8777095

Molecular Weight (calculated)

57769.7 Da

IEP (calculated)

9.227

GRAVY (calculated)

-0.597

Length

504 amino acids

Sequence
(BLAST)

001: MGKILKTKSS WPRTVVRKWL NLRSSAYEFH SDYQVKGERL ARAVTEPTQP RRKSCSDGDY YMIVPGKYPG WLGQANGDLN QSMGEHVARV DDKLDLKMFV
101: GTWNVGGKSP HDGLDLKDWL KSPADTDIYV LGFQEIVPLN AGNVLGAEDN GPAAKWLSLI REALNNNNNI SHKDLELSIN HRTFLELAKS SQQPRHSFSS
201: LPDDNPFACN STPLRGYSLA ASKQMVGIFL CVWIRDDLRK RITNLKVSCV GRGIMGYLGN KGSISISMSL HETSLCFVCT HLTSGEREGD EIRRNLDVTE
301: IIKRTRFSRS SKDFQPESIM DHDKVIWLGD LNYRLRASSD VHEQLKNHDW EALLEEDQLK IEQRAGRVFH GWEEGKIYFA PTYKYFINSD NYVVQTEKSK
401: EKRRTPAWCD RILWKGDGMK QIWYTRGESR FSDHRPVQSL FSFHIDLTQN QSNRKTRLIH QNHRPNPVLP YTCHGKVHAE EILLLTRAQS CIVTQPRLIS
501: SAIH

Best Arabidopsis Sequence Match ( AT2G37440.1 )
(BLAST)

001: MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG
101: LDLKDWLKSP ADADIYVLGF QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD DTPIPCNSTP PRGYSLAASK
201: QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD
301: KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW
401: YVRGESKFSD HRPVQSLFSV HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

Arabidopsis Description

IP5P8Type I inositol polyphosphate 5-phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT19]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.