Factsheet for TraesCS4B01G129000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G123400.1	Wheat	plastid	94.78	97.32
TraesCS4A01G189600.1	Wheat	plastid	94.26	96.79
HORVU4Hr1G023500.2	Barley	nucleus, plastid	93.04	96.05
KXG27642	Sorghum	plastid	69.39	70.37
Zm00001d052401_P001	Maize	cytosol, nucleus, plastid	56.0	68.8
PGSC0003DMT400053156	Potato	mitochondrion	41.22	51.08
TraesCS1B01G316500.1	Wheat	plastid	48.52	50.45
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	38.61	49.89
Bra031881.1-P	Field mustard	cytosol	39.65	49.03
GSMUA_Achr9P12980_001	Banana	nucleus	42.43	48.41
CDY33984	Canola	nucleus	39.48	47.99
VIT_00s0357g00110.t01	Wine grape	golgi	37.91	46.78
GSMUA_Achr7P17700_001	Banana	nucleus	40.87	46.26
TraesCS7B01G086400.2	Wheat	nucleus, plastid	41.57	45.61
KRH59383	Soybean	nucleus	45.74	45.11
KRH43218	Soybean	nucleus	45.74	45.11
AT5G65090.1	Thale cress	nucleus	41.04	44.61
Solyc04g054830.2.1	Tomato	nucleus	42.26	43.55
CDY31285	Canola	nucleus	41.04	42.75
TraesCS6B01G331500.1	Wheat	nucleus, plastid	44.17	42.33
GSMUA_Achr5P16700_001	Banana	cytosol	30.61	41.9
TraesCS3B01G369700.1	Wheat	nucleus	46.61	41.74
CDY14538	Canola	nucleus	41.74	41.38
CDY08822	Canola	nucleus	41.57	41.28
Bra024353.1-P	Field mustard	nucleus	41.91	40.71
TraesCS5B01G434000.1	Wheat	nucleus	38.96	39.65
TraesCS4B01G276600.1	Wheat	cytosol, mitochondrion, nucleus	39.3	38.7
TraesCS4B01G017400.1	Wheat	nucleus	37.74	38.48
TraesCS5B01G201300.1	Wheat	cytosol	27.65	37.41
TraesCS4B01G230100.1	Wheat	cytosol	29.57	36.64
TraesCS1B01G052100.1	Wheat	plastid	34.09	33.22
TraesCS3B01G134300.1	Wheat	cytosol, nucleus, plastid	27.83	27.44
TraesCS3B01G275500.1	Wheat	cytosol	30.61	26.23
TraesCS1B01G373800.3	Wheat	cytosol	29.57	25.37

Protein Annotations

EnsemblPlants:TraesCS4B01G129000.1	EnsemblPlantsGene:TraesCS4B01G129000	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF241	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:168705240..168708093

Molecular Weight (calculated)

63560.2 Da

IEP (calculated)

9.765

GRAVY (calculated)

-0.482

Length

575 amino acids

Sequence
(BLAST)

001: MSHSFDAGRR SWAQKMDQKT NRRKKSPFGR IPTVKGRNSS SRYGAEHSMN TTVDLRESPE HSPMASPSAS SSSFFKSTSL KFSNYSSPVS TSTHIESFRV
101: FAATWNVAGK TPDMELNLND FLPSDDHSDV YVLGFQEVVP LNAGNVLVIE DNEPASRWLA LINQALNRTS SSPPASRSFS QSASPASALH TASSSPLDPS
201: QFHKNGSSPR EVRRAAITRG RRLKSCTCPT ERPPRRRPYS KSSSSCLMMR CGSSKNRRRY AVEGDTTTSD EEDMDVVVDG GGEASSMASD ATLLLQPAAA
301: NLQRRYCLVA CKQMVGLFAT VWARRELVAH IGHVRLSCVG RGIMGRLGNK GCISVSMSLH QTSLCFVCSH LASGEKDGDE LRRNSDVVEI LKNTQFRRVC
401: KRSGRRIPER ILDHDRVIWL GDLNYRIALS YAEAKKLVDT GDWAALFEKD QLKTEREGGV FRGWSEGVIS FAPTYKYSWN SDSYYVGEDD DGAASKKKTK
501: RRTPAWCDRI LWRGDGIVQV AYVRGESKFS DHRPVCGAFI VEIAVLDGAA KMVKLVAATA SMKVGAEELL LPRQP

Best Arabidopsis Sequence Match ( AT5G04980.1 )
(BLAST)

001: MPTQQIQSLR VFVATWNVGG KSPHSGLNLD ALLHVHSEFD VYVLGFQEIV PLNAGNVLVL GDNEPAAKWL AMINQSLNKS SSSSGGRLSP KTPSFGAGSM
101: FFAKPSLKKI SESFRTECRR KLKICNCSTF SEDIVRKYGR ESCFRCPEGL VNQSGVLSDD EEDEDDDDDD EDEDEGGGKV ASLVSNQMTM KYGLVASKQM
201: VGIFLTVWMR KELIQHVSHL RISSVTRGIM GCLGNKGCIA VSLQLYKTSF CFICSHLASG EREGDERRRN LDVIEILKNT SFPRICRTSF TRVPDRITKH
301: DRVIWLGDLN YRIALSYSET KTLLDKNAWD TLLNKDQLKI ERDAGRVFKG WHEGKIFFAP TYKYSYNSDA YAGDTSKEKK NKRRTPAWCD RILWHGDGIR
401: QLSYVRGESR FSDHRPVCSV FVVDVEVCEG KTGTRRQ

Arabidopsis Description

IP5P10Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.