Factsheet for TraesCS6A01G302300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G281800.1	Wheat	nucleus, plastid	97.82	97.17
TraesCS6B01G331500.1	Wheat	nucleus, plastid	96.15	95.67
HORVU6Hr1G075060.26	Barley	nucleus	93.8	91.95
Os02t0751900-01	Rice	plasma membrane	77.05	81.27
KXG30738	Sorghum	nucleus	70.69	73.01
Zm00001d052232_P002	Maize	nucleus	64.66	72.69
Zm00001d018078_P002	Maize	nucleus	69.68	71.85
PGSC0003DMT400053156	Potato	mitochondrion	49.08	63.15
Bra031881.1-P	Field mustard	cytosol	48.07	61.72
GSMUA_Achr9P12980_001	Banana	nucleus	51.93	61.51
CDY33984	Canola	nucleus	48.41	61.1
GSMUA_Achr7P17700_001	Banana	nucleus	49.92	58.66
TraesCS7A01G181500.1	Wheat	nucleus, plastid	48.24	58.18
VIT_00s0556g00010.t01	Wine grape	golgi, vacuole	42.88	57.53
AT5G65090.1	Thale cress	nucleus	50.59	57.09
Solyc04g054830.2.1	Tomato	nucleus	52.09	55.73
VIT_00s0357g00110.t01	Wine grape	golgi	43.05	55.15
GSMUA_Achr5P16700_001	Banana	cytosol	38.69	55.0
KRH59383	Soybean	nucleus	53.1	54.37
CDY31285	Canola	nucleus	50.08	54.17
KRH43218	Soybean	nucleus	52.76	54.03
CDY08822	Canola	nucleus	51.76	53.37
CDY14538	Canola	nucleus	51.59	53.1
Bra024353.1-P	Field mustard	nucleus	51.59	52.03
TraesCS1A01G305800.2	Wheat	plastid	42.88	46.29
TraesCS4A01G189600.1	Wheat	plastid	42.55	45.36
TraesCS3A01G338100.1	Wheat	nucleus, plastid	43.38	44.58
TraesCS5A01G432000.1	Wheat	nucleus	39.87	42.12
TraesCS4A01G029300.1	Wheat	cytosol, mitochondrion, nucleus	39.87	40.82
TraesCS6A01G225700.2	Wheat	nucleus	38.86	40.42
TraesCS4A01G296200.1	Wheat	nucleus	37.86	40.07
TraesCS4A01G073900.1	Wheat	cytosol	29.98	38.49
TraesCS1A01G039300.1	Wheat	plastid	37.19	37.37
TraesCS5A01G202800.2	Wheat	endoplasmic reticulum, vacuole	27.14	36.4
TraesCS1A01G357300.2	Wheat	cytosol	30.65	28.86
TraesCS3A01G114900.1	Wheat	cytosol	27.64	28.11
TraesCS3A01G244500.1	Wheat	cytosol	30.65	27.23

Protein Annotations

EnsemblPlants:TraesCS6A01G302300.1	EnsemblPlantsGene:TraesCS6A01G302300	Gene3D:3.60.10.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc	InterPro:IPR036691
PANTHER:PTHR11200	PANTHER:PTHR11200:SF106	PFAM:PF03372	SEG:seg	SMART:SM00128	SUPFAM:SSF56219
MapMan:27.5.4.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:535977607..535980091

Molecular Weight (calculated)

66627.7 Da

IEP (calculated)

8.973

GRAVY (calculated)

-0.571

Length

597 amino acids

Sequence
(BLAST)

001: MSTHHHHHSL SSNAVPRDIP KPASADELAK NGKKKKSFMS NIFRKKGRSG AGSSDKRPPS RRDRDFLFDL EEKYGERERA DAAAAAEFVD ASPAVRKSVS
101: DRHCAKRIES LTLSCLDSPN RNVDTREYRV FVGTWNVGGR PPNSSLNLED FLQIEGLPDI YVLGFQEIVP LNAGNVLVVE DNEPAAKWLA LIYQALNKPQ
201: QQQAQQDQPS SGDELSPTES VASSSSSRAR PSIPRSSSSG TLFFSKPTLK ALSKSYRVNS ALVKTCTCMA DPSTMHRRAR EMRDFIYRVE ASPSAADDPD
301: PSCSSSSSSA MTTPAAPEAG GIGGGGMSYC LIASKQMVGI FLSVWVRREL VQNIGHLRVD SVGRGIMGRL GNKGCIAMSM TLHQTSVCFV CSHLASGEKD
401: GDEVRRNSDV AEILKSTQFP RICKVPGQRI PEKIIDHDRI IWLGDLNYRV ALSYDETRVL LEQNDWDTLL ENDQLMIERQ AGRVFKGWKE GKIYFAPTYK
501: YKLNSDTYAG ETTKSKRKRR TPSWCDRILW HGKGIEQLQY IRGEHRFSDH RPVCSVFVVE ADADNGSRIR KGYSTLDSRV HCESPLPIPQ RHSFYDF

Best Arabidopsis Sequence Match ( AT5G65090.1 )
(BLAST)

001: MNNRGNNDDL DHHYGVFNDF ERRMTSRKKS VLDNTSPMIW KTVSERKSSP GIEGLNLSSF DRPMAPTTEI RELRVFLATW NVGGRTPNND LNLEDFLLVE
101: GTADLYICGF QEIVPLSAGN VLVVEDNEPA AKWLALISQA LNKPKQESVY SNAAYSASRT TTCSSSSCGS EESRAPSSLS FFQRPNLKVL SRNYRVDSSL
201: LKTCNCPVID TSVGWEARRS KRFSDPSTDS SNNVEPENFR VHENFLFDDV PATTKMPGQM SYRLIASKQM VGLFLSVWAR RELIPHISHL RLDSVGRGIM
301: GRLGNKGCIA ISMSLHQTSF CFVCSHLASG EKEGDELRRN ADVAEILKHT QFPKLTKNPN CHAPERIIDH DRVLWLGDLN YRVALTYEET RVLLEDNDWD
401: TLLERDQLNM ERGAGRVFSG FQEGQIFFAP TYKYSQNSDA YAGEMTKSKK KRRTPAWCDR ILWKGEGIEQ LSYIRGESRF SDHRPVCAIF AVEVDVKSLN
501: KGRFRKGYSC AAVRLVEDVA IPQRHSFYD

Arabidopsis Description

IP5P5Type I inositol polyphosphate 5-phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.