Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g008690.2.1 | Tomato | plasma membrane | 79.22 | 83.14 |
| PGSC0003DMT400080283 | Potato | cytosol | 28.81 | 56.83 |
| PGSC0003DMT400078032 | Potato | cytosol, nucleus, peroxisome | 43.21 | 40.31 |
| PGSC0003DMT400080282 | Potato | endoplasmic reticulum, extracellular, plastid | 17.73 | 35.36 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011323 | EnsemblPlantsGene:PGSC0003DMG400004430 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Sugar_P_trans_dom |
| PANTHER:PTHR44371 | PFAM:PF03151 | PGSC:PGSC0003DMG400004430 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00029689F9 |
| UniProt:M0ZZD6 | MapMan:24.2.1.1.4 | : | : | : | : |
Description
GDP-mannose transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400004430]
Coordinates
chr1:-:4908899..4913652
Molecular Weight (calculated)
39845.0 Da
IEP (calculated)
9.242
GRAVY (calculated)
0.404
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPRGLPAGV SQDSHGSILE RLHIDDASNG GQGGERSFLV YQSNLLDEVS SPVRREVANR PFFMKAVKRI DNDVENGKLE VKEKSIRNNM LVTVHNKSML
101: SGIAYCISSC SMILVNKYVL SSYNFNAGIS LMLYQNFVSV VVVSMLSFFG IISTEPLTLR LIKVWLPVNV IFVGMLITSM FSLKYLNVAM VTVLKNVTNV
201: ITAVGEMYIF NKHHDSRVWT ALLLMIVSAV SGGITDLSFH ATGYTWQIIN CFLTASYSLT LRRIMDTAKQ VTKSGNLDEF SMVLLNNTLS LPLGLLLVLV
301: FNEVDYLSTT LVGSLNKIPL SVAGIFLFNV PTSLDNTASI FFGLLAGVFF ARAKMQEKSQ S
101: SGIAYCISSC SMILVNKYVL SSYNFNAGIS LMLYQNFVSV VVVSMLSFFG IISTEPLTLR LIKVWLPVNV IFVGMLITSM FSLKYLNVAM VTVLKNVTNV
201: ITAVGEMYIF NKHHDSRVWT ALLLMIVSAV SGGITDLSFH ATGYTWQIIN CFLTASYSLT LRRIMDTAKQ VTKSGNLDEF SMVLLNNTLS LPLGLLLVLV
301: FNEVDYLSTT LVGSLNKIPL SVAGIFLFNV PTSLDNTASI FFGLLAGVFF ARAKMQEKSQ S
001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS
Arabidopsis Description
GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.