Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g065030.1.1 | Tomato | extracellular | 56.91 | 46.19 |
| PGSC0003DMT400011323 | Potato | cytosol, peroxisome, plasma membrane | 35.36 | 17.73 |
| PGSC0003DMT400078032 | Potato | cytosol, nucleus, peroxisome | 21.55 | 10.08 |
| PGSC0003DMT400080283 | Potato | cytosol | 2.76 | 2.73 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400080282 | EnsemblPlantsGene:PGSC0003DMG401031251 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR44371 |
| PGSC:PGSC0003DMG401031251 | TMHMM:TMhelix | UniParc:UPI0002966A17 | UniProt:M1D393 | MapMan:35.1 | : |
Description
GDP-mannose transporter [Source:PGSC_GENE;Acc:PGSC0003DMG401031251]
Coordinates
chr11:+:36218907..36220054
Molecular Weight (calculated)
19883.5 Da
IEP (calculated)
8.496
GRAVY (calculated)
0.734
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCTTCCPFF PPNSRFLCCS LSAELFPKNY LVGHKPSIYP YVCSVSCAIT NSFVLLSSRI VVQLVAVISQ VNTVSLHIED FATCIFICRP LLQLPTFWLV
101: TTFSGLLGLA ISFTSMWFLH QTSATTYSLV GSLNKIPLSV AGIFLFHVST SLENSASILF GLLAGVFFAR AKMQDKSQTR S
101: TTFSGLLGLA ISFTSMWFLH QTSATTYSLV GSLNKIPLSV AGIFLFHVST SLENSASILF GLLAGVFFAR AKMQDKSQTR S
001: MYRICVCRRC LKSRLNLIVY LNYIFFDSLK YINVAMVTVL KNVTNVITAV GEMYLFNKQH DNRVWAALFL MIISAVSGGI TDLSFNAVGY AWQIANCFLT
101: ASYSLTLRKT MDTAKQVTQS GNLNEFSMVL LNNTLSLPLG LLLSYFFNEM DYLYQTPLLR LPSFWMVMTL SGLLGLAISF TSMWFLHQTG ATTYSLVGSL
201: NKIPLSIAGI VLFNVPTSLQ NSASILFGLV AGVVFARAKM REKS
101: ASYSLTLRKT MDTAKQVTQS GNLNEFSMVL LNNTLSLPLG LLLSYFFNEM DYLYQTPLLR LPSFWMVMTL SGLLGLAISF TSMWFLHQTG ATTYSLVGSL
201: NKIPLSIAGI VLFNVPTSLQ NSASILFGLV AGVVFARAKM REKS
Arabidopsis Description
GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.