Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 4
- extracellular 5
- endoplasmic reticulum 3
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400080282 | Potato | endoplasmic reticulum, extracellular, plastid | 46.19 | 56.91 |
| Solyc01g008690.2.1 | Tomato | plasma membrane | 85.2 | 55.23 |
| Solyc06g076830.1.1 | Tomato | plastid | 49.78 | 24.89 |
| Solyc11g065020.1.1 | Tomato | cytosol | 3.14 | 3.47 |
Protein Annotations
| EnsemblPlants:Solyc11g065030.1.1 | EnsemblPlantsGene:Solyc11g065030.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005338 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:1990570 | PANTHER:PTHR44371 |
| PANTHER:PTHR44371:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002769807 | UniProt:K4D9B6 | MapMan:24.2.1.1.4 |
Description
No Description!
Coordinates
chr11:+:50340873..50346908
Molecular Weight (calculated)
24726.6 Da
IEP (calculated)
9.645
GRAVY (calculated)
0.597
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVLKYINVA MVTVLKNVTN VITAVGEMYL FNKTHDNKVW TALFLMIISA VTGGITDLSF HAIGYTWQII NCFLTASYSL TLRRVMDTAK QVTKSGNLDE
101: FSMVLLNNTL SLPLGILLIL LFNEMDYLSR TPLLQLPAFW LVTTFSGLLG LAISFTSMWF LHQTSATTYS LVGSLNKIPL SVAGIFLFHV STSLENSASI
201: LFGLLAGVFF ARAKMQDKSQ TRS
101: FSMVLLNNTL SLPLGILLIL LFNEMDYLSR TPLLQLPAFW LVTTFSGLLG LAISFTSMWF LHQTSATTYS LVGSLNKIPL SVAGIFLFHV STSLENSASI
201: LFGLLAGVFF ARAKMQDKSQ TRS
001: MYRICVCRRC LKSRLNLIVY LNYIFFDSLK YINVAMVTVL KNVTNVITAV GEMYLFNKQH DNRVWAALFL MIISAVSGGI TDLSFNAVGY AWQIANCFLT
101: ASYSLTLRKT MDTAKQVTQS GNLNEFSMVL LNNTLSLPLG LLLSYFFNEM DYLYQTPLLR LPSFWMVMTL SGLLGLAISF TSMWFLHQTG ATTYSLVGSL
201: NKIPLSIAGI VLFNVPTSLQ NSASILFGLV AGVVFARAKM REKS
101: ASYSLTLRKT MDTAKQVTQS GNLNEFSMVL LNNTLSLPLG LLLSYFFNEM DYLYQTPLLR LPSFWMVMTL SGLLGLAISF TSMWFLHQTG ATTYSLVGSL
201: NKIPLSIAGI VLFNVPTSLQ NSASILFGLV AGVVFARAKM REKS
Arabidopsis Description
GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.