Factsheet for Solyc06g076830.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
golgi 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078032	Potato	cytosol, nucleus, peroxisome	84.53	97.42
CDY06248	Canola	peroxisome, plasma membrane, plastid	55.16	67.96
Bra031568.1-P	Field mustard	peroxisome, plasma membrane, plastid	54.93	67.68
CDY09926	Canola	nucleus, peroxisome, plasma membrane	54.71	67.4
VIT_06s0004g06270.t01	Wine grape	peroxisome	59.42	66.92
KRG98331	Soybean	cytosol, peroxisome, plasma membrane	58.74	66.67
Bra015571.1-P	Field mustard	nucleus, peroxisome, plasma membrane	54.26	64.02
CDY06695	Canola	nucleus, peroxisome, plasma membrane	54.26	64.02
CDY10265	Canola	nucleus, peroxisome, plasma membrane	53.59	63.73
CDY05069	Canola	cytosol, endoplasmic reticulum, plasma membrane	14.8	62.86
Os03t0826300-00	Rice	cytosol, peroxisome, vacuole	52.69	60.72
Zm00001d034706_P001	Maize	cytosol, peroxisome, vacuole	52.47	60.31
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	52.24	58.99
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	52.24	58.99
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	52.24	58.99
AT1G07290.1	Thale cress	cytosol, peroxisome, plasma membrane	46.41	58.47
KXG37228	Sorghum	plastid	54.93	53.96
HORVU5Hr1G114990.3	Barley	extracellular, mitochondrion, plasma membrane	50.9	52.3
Solyc11g065030.1.1	Tomato	extracellular	24.89	49.78
Solyc01g008690.2.1	Tomato	plasma membrane	36.32	47.09
CDY65829	Canola	cytosol, peroxisome, plastid	18.61	40.49
Solyc11g065020.1.1	Tomato	cytosol	13.9	30.69

Protein Annotations

EnsemblPlants:Solyc06g076830.1.1	EnsemblPlantsGene:Solyc06g076830.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005338	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015780	GO:GO:0015784	GO:GO:0016020	GO:GO:0016021
GO:GO:1990570	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PANTHER:PTHR44371:SF2	PFAM:PF03151	TMHMM:TMhelix
UniParc:UPI00027672EC	UniProt:K4CA41	MapMan:24.2.1.1.4	:	:	:

Description

No Description!

Coordinates

chr6:+:47721977..47727824

Molecular Weight (calculated)

49256.7 Da

IEP (calculated)

10.064

GRAVY (calculated)

0.444

Length

446 amino acids

Sequence
(BLAST)

001: MSSSIAYMLF SDPRFPFALR TLQKAVSFSS HVFYVNWRIF VALGDFRSSL ESEDLRVDSM SSAVKLESVI CQNDEDPNYT SVNGKVAFAK RLNVVRKILE
101: GFRRQGDWSA IKTSIGAVRR VASSRYSKSN QAVDTEETRE HGSGRNSGPL LSGTAYCLSS CCMIMLNKIV LSSYSFNAGV SLMFYQNLIS TLIVGILGCS
201: GAITVEKLNW KLIKVWIPVN LIFIGMLVSG MYSLKYINIA MVTILKNVTN ILTALGELYI FGKRQNQKVW TAMFVMIISA VSGGITDLSF DATGYAWQSV
301: NCVLTASYSL TLRRVMDRAK QFTKSGSLNE VSMVLLNNGI SIPFAIILIF LFDEWRYVIN ADVIKIPMFW VAATASGLLG LAISFTSMWF LKQTGPTTYS
401: LVGSLNKIPI SIAGLLVFKV PLSIPNLFSI LFGLLAGVLF ARAKMS

Best Arabidopsis Sequence Match ( AT2G13650.3 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.