Factsheet for HORVU5Hr1G114990.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:

plastid 1
extracellular 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane
Any Predictor:	extracellular, mitochondrion, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	87.56	96.2
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	87.33	95.95
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	86.41	94.94
Zm00001d034706_P001	Maize	cytosol, peroxisome, vacuole	75.35	84.28
Os03t0826300-00	Rice	cytosol, peroxisome, vacuole	74.88	83.98
KXG37228	Sorghum	plastid	75.58	72.25
PGSC0003DMT400078032	Potato	cytosol, nucleus, peroxisome	52.07	58.4
VIT_06s0004g06270.t01	Wine grape	peroxisome	52.77	57.83
Bra031568.1-P	Field mustard	peroxisome, plasma membrane, plastid	47.93	57.46
CDY06248	Canola	peroxisome, plasma membrane, plastid	47.93	57.46
Bra015571.1-P	Field mustard	nucleus, peroxisome, plasma membrane	50.0	57.41
CDY06695	Canola	nucleus, peroxisome, plasma membrane	50.0	57.41
CDY10265	Canola	nucleus, peroxisome, plasma membrane	49.54	57.33
CDY09926	Canola	nucleus, peroxisome, plasma membrane	47.47	56.91
KRG98331	Soybean	cytosol, peroxisome, plasma membrane	50.23	55.47
Solyc06g076830.1.1	Tomato	plastid	52.3	50.9
AT1G07290.1	Thale cress	cytosol, peroxisome, plasma membrane	40.32	49.44
HORVU7Hr1G077470.1	Barley	plastid	46.54	48.1
HORVU4Hr1G009620.19	Barley	cytosol, peroxisome	45.85	48.07
CDY05069	Canola	cytosol, endoplasmic reticulum, plasma membrane	11.52	47.62
CDY65829	Canola	cytosol, peroxisome, plastid	16.13	34.15

Protein Annotations

EnsemblPlants:HORVU5Hr1G114990.3	EnsemblPlantsGene:HORVU5Hr1G114990	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015780
GO:GO:0015784	GO:GO:0016020	GO:GO:0016021	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PANTHER:PTHR44371:SF2
PFAM:PF03151	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI000B46543A
UniProt:A0A287SU04	MapMan:24.2.1.1.4	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:645394224..645397011

Molecular Weight (calculated)

47678.0 Da

IEP (calculated)

9.080

GRAVY (calculated)

0.609

Length

434 amino acids

Sequence
(BLAST)

001: LLLLLVLLGS ITSTALHFFP GRRGSHASGP VSMSLDHSPT GSLVVYGDDI EEAMSPNRSV AAVAVKDGDA SVYKIIHGFL KQKNNSIINV AASVARKAAS
101: NKLSRKTSDV FDTLIQQQQS RLGNKTGPLL SGISYCIASC SMILLNKVVL SSYNFNAGIS LMLYQNLISV VILVVLEFFA VISTEELTWK LIKVWIPVNL
201: IFVGMLVTGM YSLKYINVAM VTILKNMTNI LTAIGEIYVF RKCQNKQVWA ALCMMIISAV SGGMTDLSFH LIGYTWQILN CFLTAAYSLT LRRLMDTAKQ
301: STKSGSLNEV SMVLLNNALS IPFAVILIIV FNEWEYVYQT EVIREPMFWF FATASGLLGL AISFSSVWFL QETGPTTYSL VGSLNKIPIS VAGVLLFNVP
401: VSVENLFSIV FGSFCWDILR KGKDVQVLMF ALLA

Best Arabidopsis Sequence Match ( AT1G07290.1 )
(BLAST)

001: MSAVKLEAIV CHEPDESELS HLSDNGSKTK NGVVFQLLDQ KSSEHRWFSE RFLRWRRRYL PVDGDNRRDH GSVKQSGPLV SGAAYCISSC SMIILNKIVL
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS

Arabidopsis Description

GONST2golgi nucleotide sugar transporter 2 [Source:TAIR;Acc:AT1G07290]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.