CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078032	Potato	cytosol, nucleus, peroxisome	66.41	67.44
Bra031568.1-P	Field mustard	peroxisome, plasma membrane, plastid	61.58	66.85
CDY06248	Canola	peroxisome, plasma membrane, plastid	61.32	66.57
CDY09926	Canola	nucleus, peroxisome, plasma membrane	61.32	66.57
Bra015571.1-P	Field mustard	nucleus, peroxisome, plasma membrane	63.61	66.14
CDY06695	Canola	nucleus, peroxisome, plasma membrane	63.61	66.14
CDY10265	Canola	nucleus, peroxisome, plasma membrane	63.1	66.13
VIT_06s0004g06270.t01	Wine grape	peroxisome	64.89	64.39
CDY05069	Canola	cytosol, endoplasmic reticulum, plasma membrane	15.78	59.05
Zm00001d034706_P001	Maize	cytosol, peroxisome, vacuole	58.02	58.76
Solyc06g076830.1.1	Tomato	plastid	66.67	58.74
Os03t0826300-00	Rice	cytosol, peroxisome, vacuole	57.51	58.4
AT1G07290.1	Thale cress	cytosol, peroxisome, plasma membrane	51.65	57.34
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	57.51	57.22
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	56.74	56.46
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	56.74	56.46
KXG37228	Sorghum	plastid	59.03	51.1
HORVU5Hr1G114990.3	Barley	extracellular, mitochondrion, plasma membrane	55.47	50.23
KRH53900	Soybean	cytosol, peroxisome, plasma membrane	43.0	49.42
KRH64040	Soybean	cytosol, peroxisome, plasma membrane	42.49	48.83
CDY65829	Canola	cytosol, peroxisome, plastid	20.36	39.02

Protein Annotations

EntrezGene:100785777	MapMan:24.2.1.1.4	EMBL:ACUP02010875	EnsemblPlantsGene:GLYMA_18G066200	GO:GO:0003674	GO:GO:0005215
GO:GO:0005338	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015780	GO:GO:0015784
GO:GO:0016020	GO:GO:0016021	GO:GO:1990570	UniProt:K7MQB6	EnsemblPlants:KRG98331	ProteinID:KRG98331
ProteinID:KRG98331.1	PFAM:PF03151	PANTHER:PTHR44371	PANTHER:PTHR44371:SF2	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom
TMHMM:TMhelix	UniParc:UPI0002967356	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:6074656..6079537

Molecular Weight (calculated)

43432.5 Da

IEP (calculated)

9.560

GRAVY (calculated)

0.462

Length

393 amino acids

Sequence
(BLAST)

001: MSSDFKLDIF SQHDSEEPGL GTTITSKMFL DEKANSVQTI REQGKLSINN FATNAERRTL NDRFLKANKA TIGDNVSLLD EEERHHLHGS AKKSGPLISG
101: AAYCISSCSM IMLNKIVLSG YNFDAGISLM FYQNFIATLV VVLLSLSGRI SVEKLSWRLI RAWIPVNVIF IGMLVSGMYS LKYINVAMVT ILKNMTNILT
201: AIGELYLFRK RQSPKVWTAM FMMIISAVSG GITDLSFDAV GYTWQIINCV LTASYSLTLR RVMDEAKNAT KSGSLNEVSM VLLNNSLSLP FAIILIFLFG
301: EWDYVIHADV VKLPIFWVVA TASGLLGLSI SFTSMWFLHQ TSPTTYSLVG SLNKIPISIA GILVFKVPLS VSNLFSILFG LFAGVLFARA KMS

Best Arabidopsis Sequence Match ( AT2G13650.3 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.