Factsheet for Bra031568.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

nucleus 1
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	plastid
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06248	Canola	peroxisome, plasma membrane, plastid	99.72	99.72
Bra015571.1-P	Field mustard	nucleus, peroxisome, plasma membrane	86.46	82.8
PGSC0003DMT400078032	Potato	cytosol, nucleus, peroxisome	67.4	63.05
KRG98331	Soybean	cytosol, peroxisome, plasma membrane	66.85	61.58
VIT_06s0004g06270.t01	Wine grape	peroxisome	66.02	60.35
Os03t0826300-00	Rice	cytosol, peroxisome, vacuole	60.22	56.33
Zm00001d034706_P001	Maize	cytosol, peroxisome, vacuole	60.22	56.19
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	59.94	54.94
Solyc06g076830.1.1	Tomato	plastid	67.68	54.93
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	59.12	54.18
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	58.84	53.92
Bra027909.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.69	51.37
KXG37228	Sorghum	plastid	60.22	48.02
HORVU5Hr1G114990.3	Barley	extracellular, mitochondrion, plasma membrane	57.46	47.93

Protein Annotations

EnsemblPlants:Bra031568.1	EnsemblPlants:Bra031568.1-P	EnsemblPlantsGene:Bra031568	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PANTHER:PTHR44371:SF2	PFAM:PF03151	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025433E8	UniProt:M4ERZ0	MapMan:24.2.1.1.4	:	:	:

Description

AT1G07290 (E=2e-157) | nucleotide-sugar transmembrane transporter

Coordinates

chrA09:+:35796544..35798315

Molecular Weight (calculated)

39956.5 Da

IEP (calculated)

10.123

GRAVY (calculated)

0.502

Length

362 amino acids

Sequence
(BLAST)

001: MTDVEREAIV NDESEPNRFS DNASKSLVCQ LHSGFSERFL RWRRRYLPVG GGTRRGHGSV KLSGPLVSGA AYCVSSCSMI IMNKIVLSSY NFNAGVSLML
101: YQNLISCLVV ALLKLSGVVS VERFNWKLIR VWMPVNVIFV GMLISGMYSL KYINVAMVTI LKNATNIITA IGELYMFRKR QNNKVWAAMF MMIISAISGG
201: ITDLTFNAVG YTWQTANCVL TASYSLTLRR VMEKAKQSTK SGSLNEVSMV LLNNLLSLPF GIILIILLGE WRYVISTDVT QDAMFWVAAT ASGFLGLAIS
301: FTSMWFLHQT GPTTYSLVGS LNKVPISLSG LVLFDVPLSL PNLFSILFGL FAGVVFARAK MS

Best Arabidopsis Sequence Match ( AT1G07290.1 )
(BLAST)

001: MSAVKLEAIV CHEPDESELS HLSDNGSKTK NGVVFQLLDQ KSSEHRWFSE RFLRWRRRYL PVDGDNRRDH GSVKQSGPLV SGAAYCISSC SMIILNKIVL
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS

Arabidopsis Description

GONST2golgi nucleotide sugar transporter 2 [Source:TAIR;Acc:AT1G07290]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.