Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra013292.1-P | |
| Bra021018.1-P | |
| Bra040924.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G13650.1 | Bra013292.1-P | AT4G18220.1 | 15299147 |
| AT2G13650.1 | Bra021018.1-P | AT4G18220.1 | 15299147 |
| AT2G13650.1 | Bra040924.1-P | AT4G18220.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39936 | Canola | cytosol, peroxisome, plasma membrane | 99.39 | 99.39 |
| CDX95295 | Canola | cytosol, peroxisome, plasma membrane | 97.87 | 96.7 |
| AT2G13650.1 | Thale cress | cytosol, peroxisome, plasma membrane | 93.62 | 92.49 |
| VIT_04s0044g01330.t01 | Wine grape | plasma membrane | 82.37 | 80.18 |
| GSMUA_Achr8P34410_001 | Banana | plasma membrane | 77.81 | 76.19 |
| GSMUA_Achr8P34420_001 | Banana | cytosol, peroxisome, plasma membrane | 78.72 | 75.95 |
| KRH53900 | Soybean | cytosol, peroxisome, plasma membrane | 77.2 | 74.27 |
| KRH64040 | Soybean | cytosol, peroxisome, plasma membrane | 76.9 | 73.98 |
| Zm00001d020453_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 22.19 | 69.52 |
| Zm00001d009871_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 23.4 | 68.75 |
| Zm00001d024441_P001 | Maize | extracellular | 14.29 | 64.38 |
| TraesCS4A01G257100.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.7 | 60.06 |
| GSMUA_Achr1P16960_001 | Banana | extracellular | 76.9 | 59.53 |
| TraesCS7D01G321000.2 | Wheat | cytosol, peroxisome, plasma membrane | 61.09 | 54.62 |
| TraesCS7A01G323600.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.09 | 54.62 |
| Os08t0107400-01 | Rice | plastid | 56.53 | 53.14 |
| TraesCS4B01G057400.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.7 | 51.01 |
| TraesCS4D01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.7 | 51.01 |
| Zm00001d049725_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 60.79 | 47.62 |
| HORVU7Hr1G077470.1 | Barley | plastid | 60.18 | 47.14 |
| HORVU4Hr1G009620.19 | Barley | cytosol, peroxisome | 58.97 | 46.86 |
| OQU79763 | Sorghum | mitochondrion | 60.79 | 46.84 |
| Bra031568.1-P | Field mustard | peroxisome, plasma membrane, plastid | 51.37 | 46.69 |
| Zm00001d035015_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 50.76 | 46.01 |
| Bra015571.1-P | Field mustard | nucleus, peroxisome, plasma membrane | 51.06 | 44.44 |
| PGSC0003DMT400080283 | Potato | cytosol | 21.88 | 39.34 |
| Solyc11g065020.1.1 | Tomato | cytosol | 23.71 | 38.61 |
Protein Annotations
| MapMan:24.2.1.1.4 | EnsemblPlantsGene:Bra027909 | EnsemblPlants:Bra027909.1 | EnsemblPlants:Bra027909.1-P | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005457 | GO:GO:0005458 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015783 | GO:GO:0015784 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:1990570 | UniProt:M4EGJ5 | PFAM:PF03151 | PANTHER:PTHR44371 | InterPro:Sugar_P_trans_dom |
| TMHMM:TMhelix | UniParc:UPI000254214A | SEG:seg | : | : | : |
Description
AT2G13650 (E=7e-163) GONST1 | GONST1 (Golgi Nucleotide Sugar Transporter 1); GDP-mannose transmembrane transporter/ nucleotide-sugar transmembrane transporter
Coordinates
chrA09:-:9745435..9747156
Molecular Weight (calculated)
36417.4 Da
IEP (calculated)
9.602
GRAVY (calculated)
0.626
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSYEHDGVD LEDGKTRDKP TLRKIPNQAL LSGLAYCVSS CSMILVNKFV LSSYNFNAGI FLMLYQNFVS VIIVMALSLM GLITTEPLTL RLIKVWFPVN
101: VIFVGMLITS MFSLKYINVA MVTVLKNVTN VITAVGEMYL FNKHHDNKVW LALFLMIISA VSGGITDLSF NAVGYAWQIA NCFLTASYSL TLRKTMDTAK
201: QVTQSGNLNE FSMVLLNNTL SLPLGLILSF AFNEMDYLFN TPLLRLPSFW MVMTLSGLLG LAISFTSMWF LHQTGATTYS LVGSLNKIPL SIAGIVLFHV
301: PTSLQNSASI LFGLVAGVVF ARAKMREKS
101: VIFVGMLITS MFSLKYINVA MVTVLKNVTN VITAVGEMYL FNKHHDNKVW LALFLMIISA VSGGITDLSF NAVGYAWQIA NCFLTASYSL TLRKTMDTAK
201: QVTQSGNLNE FSMVLLNNTL SLPLGLILSF AFNEMDYLFN TPLLRLPSFW MVMTLSGLLG LAISFTSMWF LHQTGATTYS LVGSLNKIPL SIAGIVLFHV
301: PTSLQNSASI LFGLVAGVVF ARAKMREKS
001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS
Arabidopsis Description
GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.