Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P34420_001 | Banana | cytosol, peroxisome, plasma membrane | 71.29 | 88.86 |
| GSMUA_Achr8P34410_001 | Banana | plasma membrane | 68.71 | 86.9 |
| VIT_04s0044g01330.t01 | Wine grape | plasma membrane | 63.76 | 80.18 |
| CDY39936 | Canola | cytosol, peroxisome, plasma membrane | 59.76 | 77.2 |
| Bra027909.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 59.53 | 76.9 |
| CDX95295 | Canola | cytosol, peroxisome, plasma membrane | 60.0 | 76.58 |
| AT2G13650.1 | Thale cress | cytosol, peroxisome, plasma membrane | 59.76 | 76.28 |
| KRH53900 | Soybean | cytosol, peroxisome, plasma membrane | 61.18 | 76.02 |
| KRH64040 | Soybean | cytosol, peroxisome, plasma membrane | 60.47 | 75.15 |
| Zm00001d024441_P001 | Maize | extracellular | 11.76 | 68.49 |
| Zm00001d009871_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 17.41 | 66.07 |
| Zm00001d020453_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 16.24 | 65.71 |
| TraesCS4A01G257100.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.47 | 60.95 |
| TraesCS7A01G323600.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.18 | 56.79 |
| TraesCS7D01G321000.2 | Wheat | cytosol, peroxisome, plasma membrane | 49.18 | 56.79 |
| Os08t0107400-01 | Rice | plastid | 45.65 | 55.43 |
| TraesCS4D01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.41 | 52.76 |
| TraesCS4B01G057400.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.94 | 52.26 |
| HORVU7Hr1G077470.1 | Barley | plastid | 49.18 | 49.76 |
| OQU79763 | Sorghum | mitochondrion | 49.88 | 49.65 |
| Zm00001d049725_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 48.47 | 49.05 |
| HORVU4Hr1G009620.19 | Barley | cytosol, peroxisome | 47.29 | 48.55 |
| Zm00001d035015_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 40.94 | 47.93 |
| Solyc11g065020.1.1 | Tomato | cytosol | 21.18 | 44.55 |
| PGSC0003DMT400080283 | Potato | cytosol | 18.59 | 43.17 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P16960_001 | EnsemblPlants:GSMUA_Achr1T16960_001 | EnsemblPlantsGene:GSMUA_Achr1G16960_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | PANTHER:PTHR44371 | PFAM:PF03151 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000296E5F0 | UniProt:M0S0K4 | MapMan:24.2.1.1.4 | : | : | : |
Description
GDP-mannose transporter [Source:GMGC_GENE;Acc:GSMUA_Achr1G16960_001]
Coordinates
chr1:+:12643328..12650151
Molecular Weight (calculated)
47380.7 Da
IEP (calculated)
9.413
GRAVY (calculated)
0.484
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MESFFIDVLL FLWKICFTKF STGVPLGIPL NSPDRLLGRL DSEDASNLVL NGERTVLISR EQNGDLSPVT NLVTSGRRDV VSRSLSGAKS FCDDEMDLED
101: GKVEKDRVKT LRCYRPIKLH NQSLLSGLAY CISSCSMILV NKFVLSGYDF NAGISLMVYQ NLVSVLVVSI LRIFGVISTE PLTWKLVKVW FPVNVIFVGM
201: LITSMFSLKY INVAMVTVLK NVTNVITALG ETYLFMKHHD KRVWTALFLM IISAFSGGMT DLSFHAIGYI WQTLNCFLTA SYSLTLRRVM DTAKQVTKSG
301: KLNEFSMVLL NNTLSLPLGL LLIFAFNEVD YLYKTPLLKM PMFWLVITSS GFLGLAISFT SLWFLHQTGA TTYSLVGSLN KIPLSIAGIL LFKVPTSLEN
401: SLSILFGLLA GVFFAKAKLQ DRSQS
101: GKVEKDRVKT LRCYRPIKLH NQSLLSGLAY CISSCSMILV NKFVLSGYDF NAGISLMVYQ NLVSVLVVSI LRIFGVISTE PLTWKLVKVW FPVNVIFVGM
201: LITSMFSLKY INVAMVTVLK NVTNVITALG ETYLFMKHHD KRVWTALFLM IISAFSGGMT DLSFHAIGYI WQTLNCFLTA SYSLTLRRVM DTAKQVTKSG
301: KLNEFSMVLL NNTLSLPLGL LLIFAFNEVD YLYKTPLLKM PMFWLVITSS GFLGLAISFT SLWFLHQTGA TTYSLVGSLN KIPLSIAGIL LFKVPTSLEN
401: SLSILFGLLA GVFFAKAKLQ DRSQS
001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS
Arabidopsis Description
GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.