Factsheet for GSMUA_Achr8P34420_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
golgi 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P34410_001	Banana	plasma membrane	94.43	95.83
VIT_04s0044g01330.t01	Wine grape	plasma membrane	79.47	80.18
CDY39936	Canola	cytosol, peroxisome, plasma membrane	76.25	79.03
Bra027909.1-P	Field mustard	cytosol, peroxisome, plasma membrane	75.95	78.72
CDX95295	Canola	cytosol, peroxisome, plasma membrane	76.54	78.38
AT2G13650.1	Thale cress	cytosol, peroxisome, plasma membrane	75.07	76.88
KRH53900	Soybean	cytosol, peroxisome, plasma membrane	75.66	75.44
KRH64040	Soybean	cytosol, peroxisome, plasma membrane	75.07	74.85
GSMUA_Achr1P16960_001	Banana	extracellular	88.86	71.29
Zm00001d020453_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	21.41	69.52
Zm00001d009871_P001	Maize	endoplasmic reticulum, extracellular, vacuole	22.58	68.75
Zm00001d024441_P001	Maize	extracellular	13.49	63.01
TraesCS4A01G257100.1	Wheat	cytosol, peroxisome, plasma membrane	61.0	61.54
TraesCS7A01G323600.1	Wheat	cytosol, peroxisome, plasma membrane	60.41	55.98
TraesCS7D01G321000.2	Wheat	cytosol, peroxisome, plasma membrane	60.41	55.98
Os08t0107400-01	Rice	plastid	57.18	55.71
TraesCS4D01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	61.0	52.26
TraesCS4B01G057400.1	Wheat	cytosol, peroxisome, plasma membrane	59.82	51.26
HORVU7Hr1G077470.1	Barley	plastid	59.82	48.57
Zm00001d049725_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	59.24	48.1
OQU79763	Sorghum	mitochondrion	60.12	48.01
HORVU4Hr1G009620.19	Barley	cytosol, peroxisome	58.06	47.83
Zm00001d035015_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	50.15	47.11
Solyc11g065020.1.1	Tomato	cytosol	24.34	41.09
PGSC0003DMT400080283	Potato	cytosol	21.41	39.89

Protein Annotations

EnsemblPlants:GSMUA_Achr8P34420_001	EnsemblPlants:GSMUA_Achr8T34420_001	EnsemblPlantsGene:GSMUA_Achr8G34420_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PANTHER:PTHR44371:SF2	PFAM:PF03151	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002967115	UniProt:M0TW44	MapMan:24.2.1.1.4	:	:	:

Description

GDP-mannose transporter [Source:GMGC_GENE;Acc:GSMUA_Achr8G34420_001]

Coordinates

chr8:-:35318387..35324946

Molecular Weight (calculated)

37750.1 Da

IEP (calculated)

9.769

GRAVY (calculated)

0.603

Length

341 amino acids

Sequence
(BLAST)

001: MAGLKSFRDV EIDLEDGKVE KDRDNILRGY KPIKLRNQAL LSGLAYCISS CSMILVNKFV LSGYDFSAGI SLMLYQNLVS VIVVSILSSS GVISTEPLTW
101: KLIRVWLPVN VIFVGMLITS MFSLKYINVA MVTVLKNVTN VITALGETYL FMKHHDKKVW TALFLMIISA ISGGATDLSF HATGYAWQII NCFLTASYSL
201: TLRRVMDTAK QVTKSGNLNE FSMVLLNNTL SLPLGLLLIF AFNEVDYLYK TPLLKMPMFW LVITSSGFLG LAISFTSMWF LHQTGATTYS LVGSLNKIPL
301: SIAGIILFKV PTSMENFLSI LFGLLAGVLF AKAKMRDGSQ S

Best Arabidopsis Sequence Match ( AT2G13650.3 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.