Factsheet for TraesCS4A01G257100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G323600.1	Wheat	cytosol, peroxisome, plasma membrane	94.08	86.41
Zm00001d020453_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	26.63	85.71
TraesCS4D01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	99.11	84.17
Zm00001d009871_P001	Maize	endoplasmic reticulum, extracellular, vacuole	27.81	83.93
TraesCS4B01G057400.1	Wheat	cytosol, peroxisome, plasma membrane	97.63	82.91
Zm00001d024441_P001	Maize	extracellular	17.46	80.82
HORVU4Hr1G009620.19	Barley	cytosol, peroxisome	93.2	76.09
Os08t0107400-01	Rice	plastid	76.04	73.43
OQU79763	Sorghum	mitochondrion	85.5	67.68
Zm00001d049725_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	84.02	67.62
Zm00001d035015_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	72.49	67.49
Bra027909.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.06	61.7
CDY39936	Canola	cytosol, peroxisome, plasma membrane	60.06	61.7
GSMUA_Achr8P34410_001	Banana	plasma membrane	61.24	61.61
GSMUA_Achr8P34420_001	Banana	cytosol, peroxisome, plasma membrane	61.54	61.0
CDX95295	Canola	cytosol, peroxisome, plasma membrane	59.76	60.66
AT2G13650.1	Thale cress	cytosol, peroxisome, plasma membrane	59.47	60.36
VIT_04s0044g01330.t01	Wine grape	plasma membrane	60.06	60.06
KRH64040	Soybean	cytosol, peroxisome, plasma membrane	60.35	59.65
KRH53900	Soybean	cytosol, peroxisome, plasma membrane	59.76	59.06
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	59.17	50.63
GSMUA_Achr1P16960_001	Banana	extracellular	60.95	48.47
PGSC0003DMT400080283	Potato	cytosol	20.71	38.25
Solyc11g065020.1.1	Tomato	cytosol	22.49	37.62

Protein Annotations

EnsemblPlants:TraesCS4A01G257100.1	EnsemblPlantsGene:TraesCS4A01G257100	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PFAM:PF03151	SEG:seg
TMHMM:TMhelix	MapMan:24.2.1.1.4	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:569879972..569882429

Molecular Weight (calculated)

37456.4 Da

IEP (calculated)

9.045

GRAVY (calculated)

0.606

Length

338 amino acids

Sequence
(BLAST)

001: MRSFSVDDVD LEDVEASKDR DRPSHFLRLP NIQNQSLLSG LAYCIASCSM ILVNKFVLSG YGFNAGIFLM LYQNIVSVTI VSTLSLSGVI STEPLTWKLI
101: KVWLPVNIIF VGMLITSMFS LKYINVAMLT ILKNVANVLT ASGETYFFKK QHDRQVWISL MLMIISAIAG GVTDLSFHAV GYTWQILNCF LTASYSLTLR
201: HVMDSAKEAT RSGNLNELSM VLLNNILSLP LGVILVLGFN EVEYLLETPL LRMPTFWLVI TASGVLGLAI SFTSMWFLRQ TSATTYSLVG SLNKIPLSIA
301: GILLFKVRTS MENSISILFG LLAGVFFARA KLRENSQS

Best Arabidopsis Sequence Match ( AT2G13650.3 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.