Factsheet for TraesCS4D01G057600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G257100.1	Wheat	cytosol, peroxisome, plasma membrane	84.17	99.11
TraesCS4B01G057400.1	Wheat	cytosol, peroxisome, plasma membrane	97.99	97.99
TraesCS7D01G321000.2	Wheat	cytosol, peroxisome, plasma membrane	83.42	90.22
HORVU4Hr1G009620.19	Barley	cytosol, peroxisome	91.71	88.16
Zm00001d020453_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	22.61	85.71
Zm00001d009871_P001	Maize	endoplasmic reticulum, extracellular, vacuole	23.62	83.93
Os08t0107400-01	Rice	plastid	71.36	81.14
Zm00001d024441_P001	Maize	extracellular	14.82	80.82
Zm00001d035015_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	68.84	75.48
OQU79763	Sorghum	mitochondrion	80.15	74.71
Zm00001d049725_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	77.89	73.81
Bra027909.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.01	61.7
CDY39936	Canola	cytosol, peroxisome, plasma membrane	51.01	61.7
GSMUA_Achr8P34410_001	Banana	plasma membrane	51.76	61.31
GSMUA_Achr8P34420_001	Banana	cytosol, peroxisome, plasma membrane	52.26	61.0
CDX95295	Canola	cytosol, peroxisome, plasma membrane	50.75	60.66
AT2G13650.1	Thale cress	cytosol, peroxisome, plasma membrane	50.5	60.36
VIT_04s0044g01330.t01	Wine grape	plasma membrane	51.01	60.06
KRH64040	Soybean	cytosol, peroxisome, plasma membrane	51.26	59.65
KRH53900	Soybean	cytosol, peroxisome, plasma membrane	50.75	59.06
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	51.76	52.15
GSMUA_Achr1P16960_001	Banana	extracellular	52.76	49.41
PGSC0003DMT400080283	Potato	cytosol	19.1	41.53
Solyc11g065020.1.1	Tomato	cytosol	20.6	40.59

Protein Annotations

EnsemblPlants:TraesCS4D01G057600.1	EnsemblPlantsGene:TraesCS4D01G057600	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PFAM:PF03151	SEG:seg
TMHMM:TMhelix	MapMan:24.2.1.1.4	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:32496738..32500474

Molecular Weight (calculated)

43928.2 Da

IEP (calculated)

9.637

GRAVY (calculated)

0.386

Length

398 amino acids

Sequence
(BLAST)

001: MRIQQLGNHV DPGTPTGRKS PEISTTSPLV NGEKSKLWDQ IGGQGALASP MRREIGNRSL MRSFSVDDVD LEDVEASKDR DRPSHFLRLP NIQNQSLLSG
101: LAYCIASCSM ILVNKFVLSG YGFNAGIFLM LYQNIVSVTI VSTLSLSGVI STEPLTWKLI KVWLPVNIIF VGMLITSMFS LKYINVAMLT ILKNVANVLT
201: ASGETYFFKK QHDRQVWISL MLMIISAIAG GVTDLSFHAV GYTWQILNCF LTASYSLTLR HVMDSAKEST RSGNLNELSM VLLNNVLSLP LGVILVLGFN
301: EVEYLLETPL LRMPTFWLVI TASGVLGLAI SFTSMWFLRQ TSATTYSLVG SLNKIPLSIA GILLFKVRTS MENSISIMFG LLAGVFFARA KLRENSQS

Best Arabidopsis Sequence Match ( AT2G13650.3 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.