Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020453_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 24.52 | 84.76 |
| Zm00001d009871_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 25.62 | 83.04 |
| Zm00001d049725_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 89.81 | 77.62 |
| OQU79763 | Sorghum | mitochondrion | 91.18 | 77.52 |
| TraesCS4A01G257100.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.49 | 72.49 |
| TraesCS7D01G321000.2 | Wheat | cytosol, peroxisome, plasma membrane | 70.8 | 69.84 |
| Os08t0107400-01 | Rice | plastid | 67.22 | 69.71 |
| TraesCS7A01G323600.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.52 | 69.57 |
| TraesCS4D01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 75.48 | 68.84 |
| TraesCS4B01G057400.1 | Wheat | cytosol, peroxisome, plasma membrane | 75.48 | 68.84 |
| HORVU4Hr1G009620.19 | Barley | cytosol, peroxisome | 74.1 | 64.98 |
| HORVU7Hr1G077470.1 | Barley | plastid | 70.8 | 61.19 |
| GSMUA_Achr8P34410_001 | Banana | plasma membrane | 47.11 | 50.89 |
| Bra027909.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 46.01 | 50.76 |
| CDY39936 | Canola | cytosol, peroxisome, plasma membrane | 46.01 | 50.76 |
| CDX95295 | Canola | cytosol, peroxisome, plasma membrane | 46.01 | 50.15 |
| GSMUA_Achr8P34420_001 | Banana | cytosol, peroxisome, plasma membrane | 47.11 | 50.15 |
| AT2G13650.1 | Thale cress | cytosol, peroxisome, plasma membrane | 45.18 | 49.25 |
| VIT_04s0044g01330.t01 | Wine grape | plasma membrane | 45.73 | 49.11 |
| KRH64040 | Soybean | cytosol, peroxisome, plasma membrane | 45.45 | 48.25 |
| KRH53900 | Soybean | cytosol, peroxisome, plasma membrane | 45.45 | 48.25 |
| Zm00001d024441_P001 | Maize | extracellular | 9.64 | 47.95 |
| Zm00001d034706_P001 | Maize | cytosol, peroxisome, vacuole | 45.73 | 42.78 |
| PGSC0003DMT400080283 | Potato | cytosol | 20.94 | 41.53 |
| GSMUA_Achr1P16960_001 | Banana | extracellular | 47.93 | 40.94 |
| Solyc11g065020.1.1 | Tomato | cytosol | 22.04 | 39.6 |
Protein Annotations
| EnsemblPlants:Zm00001d035015_P001 | EnsemblPlants:Zm00001d035015_T001 | EnsemblPlantsGene:Zm00001d035015 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR44371 | ProteinID:AQK78097.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00084446F8 | UniProt:A0A1D6LDL8 |
| MapMan:24.2.1.1.4 | : | : | : | : | : |
Description
GDP-mannose transporter GONST1
Coordinates
chr6:+:1843376..1848804
Molecular Weight (calculated)
39631.8 Da
IEP (calculated)
9.895
GRAVY (calculated)
0.415
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRVLQLDV PADSEASPRR IVSGSVSSPL VNGEKGLFPN QNAGFTALAS PVRREIGNRH VRESLARSFC VDDNDLEDGK SSKERESSAQ LLRLPKIQNQ
101: ALLSGLAYCV SSCSMILVNK FVLSGYAFNA PVFLMLYQNI VSVTIVSTLS LSGAVPTEPL TWNLIKVWLP VNIIFVGMLI TSMFSLKYIN VAMLTILKNV
201: ANVLTASGET YFFKKQHGTQ VWIALLLMLT LRHVMDGAKQ ATKSGNLNEL SMVLLNNVLS LPLGIILVLG LNEVEYLLET SLLRMPEFWL VITASGVLGL
301: GISFTSMWFL HQTSATTYSL VGSLNKIPLS IAGIVLFNVR TSVQNSLSIL FGRSISRGVF RQG
101: ALLSGLAYCV SSCSMILVNK FVLSGYAFNA PVFLMLYQNI VSVTIVSTLS LSGAVPTEPL TWNLIKVWLP VNIIFVGMLI TSMFSLKYIN VAMLTILKNV
201: ANVLTASGET YFFKKQHGTQ VWIALLLMLT LRHVMDGAKQ ATKSGNLNEL SMVLLNNVLS LPLGIILVLG LNEVEYLLET SLLRMPEFWL VITASGVLGL
301: GISFTSMWFL HQTSATTYSL VGSLNKIPLS IAGIVLFNVR TSVQNSLSIL FGRSISRGVF RQG
001: MSAVKLEAIV CHEPDESELS HLSDNGSKTK NGVVFQLLDQ KSSEHRWFSE RFLRWRRRYL PVDGDNRRDH GSVKQSGPLV SGAAYCISSC SMIILNKIVL
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS
Arabidopsis Description
GONST2golgi nucleotide sugar transporter 2 [Source:TAIR;Acc:AT1G07290]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.