Factsheet for HORVU4Hr1G009620.19

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G257100.1	Wheat	cytosol, peroxisome, plasma membrane	76.09	93.2
TraesCS4D01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	88.16	91.71
TraesCS4B01G057400.1	Wheat	cytosol, peroxisome, plasma membrane	87.68	91.21
Zm00001d020453_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	21.98	86.67
Zm00001d009871_P001	Maize	endoplasmic reticulum, extracellular, vacuole	22.95	84.82
Os08t0107400-01	Rice	plastid	68.6	81.14
Zm00001d024441_P001	Maize	extracellular	14.01	79.45
Zm00001d035015_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	64.98	74.1
HORVU7Hr1G077470.1	Barley	plastid	73.67	72.62
OQU79763	Sorghum	mitochondrion	73.43	71.19
Zm00001d049725_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	70.53	69.52
GSMUA_Achr8P34410_001	Banana	plasma membrane	48.31	59.52
CDY39936	Canola	cytosol, peroxisome, plasma membrane	46.86	58.97
Bra027909.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.86	58.97
GSMUA_Achr8P34420_001	Banana	cytosol, peroxisome, plasma membrane	47.83	58.06
CDX95295	Canola	cytosol, peroxisome, plasma membrane	46.62	57.96
AT2G13650.1	Thale cress	cytosol, peroxisome, plasma membrane	46.38	57.66
VIT_04s0044g01330.t01	Wine grape	plasma membrane	46.38	56.8
KRH64040	Soybean	cytosol, peroxisome, plasma membrane	45.17	54.68
KRH53900	Soybean	cytosol, peroxisome, plasma membrane	44.93	54.39
GSMUA_Achr1P16960_001	Banana	extracellular	48.55	47.29
HORVU5Hr1G114990.3	Barley	extracellular, mitochondrion, plasma membrane	48.07	45.85
PGSC0003DMT400080283	Potato	cytosol	18.12	40.98
Solyc11g065020.1.1	Tomato	cytosol	19.08	39.11

Protein Annotations

EnsemblPlants:HORVU4Hr1G009620.19	EnsemblPlantsGene:HORVU4Hr1G009620	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Sugar_P_trans_dom
PANTHER:PTHR44371	PFAM:PF03151	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B484B15	UniProt:A0A287N574
MapMan:24.2.1.1.4	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:27583650..27586479

Molecular Weight (calculated)

45475.2 Da

IEP (calculated)

9.664

GRAVY (calculated)

0.410

Length

414 amino acids

Sequence
(BLAST)

001: STVLPCRIQQ PGIHVDPGTP TGRKSPEITT TSPLVNGGKG KLWDEIGGQS ALASPMRREI GNRPLMRSFS VDEVDLEDVE ASKDRDRRSH FLRLPNIQNQ
101: SLISGLAYCI ASCSMILVNK FVLSGYGFNA GIFLMLYQNI VSVTIVSTLS LSGVIPTEPL TWKLIKVWLP VNIIFVGMLI TSMFSLKYIN VAMLTILKNV
201: ANVLTASGET YFFKKQHDRQ VWISLMLMII SAIAGGVTDL SFHAVGYTWQ ILNCFLTASY SLTLRHVMDS AKEATRSGNL NELSMVLLNN VLSLPLGVIL
301: VLGFNEVEYL LETPLLRMPT FWIVITASGV LGLAISFTSM WFLRQTSATT YSLVGSLNKI PLSIAGILLF KVRTSMENSI SILFGATSGS VLRQGEVARK
401: LPVISCCSQI LRRA

Best Arabidopsis Sequence Match ( AT2G13650.1 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.