Factsheet for TraesCS4B01G057400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	97.99	97.99
TraesCS4A01G257100.1	Wheat	cytosol, peroxisome, plasma membrane	82.91	97.63
HORVU4Hr1G009620.19	Barley	cytosol, peroxisome	91.21	87.68
Zm00001d020453_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	22.36	84.76
Zm00001d009871_P001	Maize	endoplasmic reticulum, extracellular, vacuole	23.37	83.04
Zm00001d024441_P001	Maize	extracellular	14.82	80.82
Os08t0107400-01	Rice	plastid	70.85	80.57
Zm00001d035015_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	68.84	75.48
OQU79763	Sorghum	mitochondrion	80.15	74.71
Zm00001d049725_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	77.64	73.57
CDY39936	Canola	cytosol, peroxisome, plasma membrane	51.01	61.7
Bra027909.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.01	61.7
CDX95295	Canola	cytosol, peroxisome, plasma membrane	51.01	60.96
GSMUA_Achr8P34410_001	Banana	plasma membrane	51.01	60.42
AT2G13650.1	Thale cress	cytosol, peroxisome, plasma membrane	50.25	60.06
GSMUA_Achr8P34420_001	Banana	cytosol, peroxisome, plasma membrane	51.26	59.82
VIT_04s0044g01330.t01	Wine grape	plasma membrane	50.25	59.17
KRH64040	Soybean	cytosol, peroxisome, plasma membrane	50.75	59.06
KRH53900	Soybean	cytosol, peroxisome, plasma membrane	50.5	58.77
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	50.25	50.63
GSMUA_Achr1P16960_001	Banana	extracellular	52.26	48.94
PGSC0003DMT400080283	Potato	cytosol	19.6	42.62
Solyc11g065020.1.1	Tomato	cytosol	20.85	41.09

Protein Annotations

EnsemblPlants:TraesCS4B01G057400.1	EnsemblPlantsGene:TraesCS4B01G057400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005457	GO:GO:0005458
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810
GO:GO:0008150	GO:GO:0015783	GO:GO:1990570	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PFAM:PF03151
SEG:seg	TMHMM:TMhelix	MapMan:24.2.1.1.4	:	:	:

Description

No Description!

Coordinates

chr4B:+:47497810..47501609

Molecular Weight (calculated)

43934.2 Da

IEP (calculated)

9.646

GRAVY (calculated)

0.396

Length

398 amino acids

Sequence
(BLAST)

001: MRIQQLGNHV DPGTPTGRKS PEITTTSPLV NGEKSKLWDQ IGGQGALASP MRREIGNRSL MRSFSVDDVD LEDVEASKER DRPSHFLRLP NIQNQSLLSG
101: LAYCIASCSM ILVNKFVLSG YGFNAGIFLM LYQNIVSVTI VSALSISGVI PTEPLTWRLI KVWLPVNIIF VGMLITSMFS LKYINVAMLT ILKNVANVLT
201: ASGETYFFKK QHDRQVWISL MLMIISAIAG GVTDLSFHAV GYTWQVLNCF LTASYSLTLR HVMDSAKEAT RSGNLNELSM VLLNNVLSLP LGVILVLGFN
301: EVEYLLETPL LRMPTFWLVI TASGVLGLAI SFTSMWFLRQ TSATTYSLVG SLNKIPLSIA GILLFKVRTS MENSISIMFG LLAGVFFARA KLRENSQS

Best Arabidopsis Sequence Match ( AT2G13650.3 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.