Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G323600.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.37 | 98.37 |
| Zm00001d020453_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 24.46 | 85.71 |
| Zm00001d009871_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 25.82 | 84.82 |
| TraesCS4D01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 90.22 | 83.42 |
| Zm00001d024441_P001 | Maize | extracellular | 16.3 | 82.19 |
| HORVU7Hr1G077470.1 | Barley | plastid | 92.12 | 80.71 |
| Os08t0107400-01 | Rice | plastid | 73.1 | 76.86 |
| Zm00001d035015_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 69.84 | 70.8 |
| OQU79763 | Sorghum | mitochondrion | 81.79 | 70.49 |
| Zm00001d049725_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 80.16 | 70.24 |
| VIT_04s0044g01330.t01 | Wine grape | plasma membrane | 56.25 | 61.24 |
| CDY39936 | Canola | cytosol, peroxisome, plasma membrane | 54.62 | 61.09 |
| Bra027909.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 54.62 | 61.09 |
| GSMUA_Achr8P34410_001 | Banana | plasma membrane | 55.71 | 61.01 |
| GSMUA_Achr8P34420_001 | Banana | cytosol, peroxisome, plasma membrane | 55.98 | 60.41 |
| CDX95295 | Canola | cytosol, peroxisome, plasma membrane | 54.62 | 60.36 |
| AT2G13650.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.35 | 60.06 |
| KRH64040 | Soybean | cytosol, peroxisome, plasma membrane | 54.62 | 58.77 |
| KRH53900 | Soybean | cytosol, peroxisome, plasma membrane | 54.08 | 58.19 |
| TraesCS5D01G502800.1 | Wheat | cytosol, peroxisome, vacuole | 55.71 | 51.9 |
| GSMUA_Achr1P16960_001 | Banana | extracellular | 56.79 | 49.18 |
| PGSC0003DMT400080283 | Potato | cytosol | 19.84 | 39.89 |
| Solyc11g065020.1.1 | Tomato | cytosol | 21.2 | 38.61 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G321000.2 | EnsemblPlantsGene:TraesCS7D01G321000 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR44371 | PFAM:PF03151 | SEG:seg |
| TMHMM:TMhelix | MapMan:24.2.1.1.4 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:411025059..411028630
Molecular Weight (calculated)
40374.2 Da
IEP (calculated)
9.305
GRAVY (calculated)
0.531
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRNPPLVT HVDPDAPPGR KAPDIGNRST MGTSCVDDTD LEDVKASKDR DMPSHLLMLP NIQNQSLLSG FAYCIASCSM ILVNKFVLSG YGFNAGIFLM
101: IYQNIVSVTI VSALSLSGVI PTEPLTWKLI KVWLPVNIIF VGMLITSMFS LKYINVAMLT ILKNVANVLT ASGETYFFKK QHDRQVWISL MLMIISAIAG
201: GITDLSFHAV GYTWQILNCF LTASYSLTLR HVMDSAKQAT KSGNLNELSM VLLNNVLSLP LGIILVLGFN EVEYLLETPL LRMPMFWLVI TASGVLGLAI
301: SFTSMWFLRQ TSATTYSLVG SLNKIPLSIA GILLFKVRTS MENSISILLG LLAGVFFARA KLRNNSQS
101: IYQNIVSVTI VSALSLSGVI PTEPLTWKLI KVWLPVNIIF VGMLITSMFS LKYINVAMLT ILKNVANVLT ASGETYFFKK QHDRQVWISL MLMIISAIAG
201: GITDLSFHAV GYTWQILNCF LTASYSLTLR HVMDSAKQAT KSGNLNELSM VLLNNVLSLP LGIILVLGFN EVEYLLETPL LRMPMFWLVI TASGVLGLAI
301: SFTSMWFLRQ TSATTYSLVG SLNKIPLSIA GILLFKVRTS MENSISILLG LLAGVFFARA KLRNNSQS
001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYR
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYR
Arabidopsis Description
GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.