Factsheet for PGSC0003DMT400078032

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	nucleus
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g076830.1.1	Tomato	plastid	97.42	84.53
CDY06248	Canola	peroxisome, plasma membrane, plastid	63.31	67.68
Bra031568.1-P	Field mustard	peroxisome, plasma membrane, plastid	63.05	67.4
VIT_06s0004g06270.t01	Wine grape	peroxisome	68.73	67.17
CDY09926	Canola	nucleus, peroxisome, plasma membrane	62.53	66.85
KRG98331	Soybean	cytosol, peroxisome, plasma membrane	67.44	66.41
Bra015571.1-P	Field mustard	nucleus, peroxisome, plasma membrane	62.53	64.02
CDY06695	Canola	nucleus, peroxisome, plasma membrane	62.53	64.02
CDY10265	Canola	nucleus, peroxisome, plasma membrane	61.76	63.73
CDY05069	Canola	cytosol, endoplasmic reticulum, plasma membrane	17.05	62.86
Os03t0826300-00	Rice	cytosol, peroxisome, vacuole	60.72	60.72
Zm00001d034706_P001	Maize	cytosol, peroxisome, vacuole	60.72	60.57
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	60.21	58.99
AT1G07290.1	Thale cress	cytosol, peroxisome, plasma membrane	53.75	58.76
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	59.95	58.73
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	59.69	58.48
HORVU5Hr1G114990.3	Barley	extracellular, mitochondrion, plasma membrane	58.4	52.07
KXG37228	Sorghum	plastid	60.72	51.76
PGSC0003DMT400011323	Potato	cytosol, peroxisome, plasma membrane	40.31	43.21
CDY65829	Canola	cytosol, peroxisome, plastid	21.45	40.49
PGSC0003DMT400080283	Potato	cytosol	14.47	30.6
PGSC0003DMT400080282	Potato	endoplasmic reticulum, extracellular, plastid	10.08	21.55

Protein Annotations

EnsemblPlants:PGSC0003DMT400078032	EnsemblPlantsGene:PGSC0003DMG402030350	EntrezGene:102585828	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015780	GO:GO:0015784	GO:GO:0016020	GO:GO:0016021	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371
PANTHER:PTHR44371:SF2	PFAM:PF03151	PGSC:PGSC0003DMG402030350	RefSeq:XP_006350827.1	TMHMM:TMhelix	UniParc:UPI000296EF7F
UniProt:M1CZA1	MapMan:24.2.1.1.4	:	:	:	:

Description

GONST2 Golgi Nucleotide sugar transporter [Source:PGSC_GENE;Acc:PGSC0003DMG402030350]

Coordinates

chr6:+:57094190..57097929

Molecular Weight (calculated)

42501.7 Da

IEP (calculated)

10.198

GRAVY (calculated)

0.495

Length

387 amino acids

Sequence
(BLAST)

001: MSSAVKLESV ICQNGEEPDY ISVNGKVAFA KRLNVVRKIL EGFRRQGDWS AIKTSIGAVR RVASNRYSKS NQAVDTEEKR EHGSGRNSGP LLSGTAYCLS
101: SCCMIMLNKI VLSSYSFNAG VSLMFYQNLI STLIVGILGC SGAVTVEKLN WKLIKVWIPV NLIFIGMLVS SMYSLKYINI AMVTILKNVT NILTAIGELY
201: IFGKRQNQKV WTAMFVMIIS AVSGGITDLS FDATGYAWQS VNCILTASYS LTLRRVMDRA KQFTKSGSLN EVSMVLLNNG ISIPFAIILI FLFDEWRYVI
301: NADVIKIPMF WVAATASGLL GLAISFTSMW FLKQTGPTTY SLVGSLNKIP ISIAGLLVFK VPLSIPNLFS ILFGLLAGVL FARAKMS

Best Arabidopsis Sequence Match ( AT2G13650.3 )
(BLAST)

001: MKLYEHDGVD LEDGKTVKSG GDKPIPRKIH NRALLSGLAY CISSCSMILV NKFVLSSYNF NAGIFLMLYQ NFVSVIIVVG LSLMGLITTE PLTLRLMKVW
101: FPVNVIFVGM LITSMFSLKY INVAMVTVLK NVTNVITAVG EMYLFNKQHD NRVWAALFLM IISAVSGGIT DLSFNAVGYA WQIANCFLTA SYSLTLRKTM
201: DTAKQVTQSG NLNEFSMVLL NNTLSLPLGL LLSYFFNEMD YLYQTPLLRL PSFWMVMTLS GLLGLAISFT SMWFLHQTGA TTYSLVGSLN KIPLSIAGIV
301: LFNVPTSLQN SASILFGLVA GVVFARAKMR EKS

Arabidopsis Description

GONST1GDP-mannose transporter (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1B0VP09]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.