Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65829 | Canola | cytosol, peroxisome, plastid | 74.29 | 38.05 |
| CDY06248 | Canola | peroxisome, plasma membrane, plastid | 75.24 | 21.82 |
| CDY09926 | Canola | nucleus, peroxisome, plasma membrane | 74.29 | 21.55 |
| AT1G07290.1 | Thale cress | cytosol, peroxisome, plasma membrane | 68.57 | 20.34 |
| CDY06695 | Canola | nucleus, peroxisome, plasma membrane | 72.38 | 20.11 |
| CDY10265 | Canola | nucleus, peroxisome, plasma membrane | 70.48 | 19.73 |
| PGSC0003DMT400078032 | Potato | cytosol, nucleus, peroxisome | 62.86 | 17.05 |
| KRG98331 | Soybean | cytosol, peroxisome, plasma membrane | 59.05 | 15.78 |
| Os03t0826300-00 | Rice | cytosol, peroxisome, vacuole | 58.1 | 15.76 |
| VIT_06s0004g06270.t01 | Wine grape | peroxisome | 57.14 | 15.15 |
| Solyc06g076830.1.1 | Tomato | plastid | 62.86 | 14.8 |
| Zm00001d034706_P001 | Maize | cytosol, peroxisome, vacuole | 54.29 | 14.69 |
| TraesCS5A01G487900.1 | Wheat | cytosol, peroxisome, vacuole | 55.24 | 14.68 |
| TraesCS5D01G502800.1 | Wheat | cytosol, peroxisome, vacuole | 55.24 | 14.68 |
| TraesCS5B01G501700.1 | Wheat | cytosol, peroxisome, vacuole | 54.29 | 14.43 |
| KXG37228 | Sorghum | plastid | 54.29 | 12.56 |
| HORVU5Hr1G114990.3 | Barley | extracellular, mitochondrion, plasma membrane | 47.62 | 11.52 |
| CDY39936 | Canola | cytosol, peroxisome, plasma membrane | 24.76 | 7.9 |
| CDX95295 | Canola | cytosol, peroxisome, plasma membrane | 24.76 | 7.81 |
Protein Annotations
| EnsemblPlants:CDY05069 | EnsemblPlantsGene:GSBRNA2T00119830001 | GO:A0A078EWU7 | PANTHER:PTHR44371 | PANTHER:PTHR44371:SF2 | ProteinID:CDY05069 |
| ProteinID:CDY05069.1 | TMHMM:TMhelix | UniParc:UPI0004EF133F | MapMan:35.1 | : | : |
Description
BnaC03g28670D
Coordinates
chrLK031959:+:414688..415723
Molecular Weight (calculated)
11488.1 Da
IEP (calculated)
6.503
GRAVY (calculated)
0.630
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MISSSDPLCS AKENKLRAVQ DVTQDAMFWE APTASGFLGL AISFTSMWFL HQTGPTTYIL VVSFIKVPIS LSGLVLFDVP LSLPNLFSIH FDLFAGVVFA
101: RAKMS
101: RAKMS
001: MSAVKLEAIV CHEPDESELS HLSDNGSKTK NGVVFQLLDQ KSSEHRWFSE RFLRWRRRYL PVDGDNRRDH GSVKQSGPLV SGAAYCISSC SMIILNKIVL
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS
Arabidopsis Description
GONST2golgi nucleotide sugar transporter 2 [Source:TAIR;Acc:AT1G07290]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.