CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06695	Canola	nucleus, peroxisome, plasma membrane	96.8	96.03
CDY06248	Canola	peroxisome, plasma membrane, plastid	82.4	85.36
CDY09926	Canola	nucleus, peroxisome, plasma membrane	81.6	84.53
CDY05069	Canola	cytosol, endoplasmic reticulum, plasma membrane	19.73	70.48
KRG98331	Soybean	cytosol, peroxisome, plasma membrane	66.13	63.1
PGSC0003DMT400078032	Potato	cytosol, nucleus, peroxisome	63.73	61.76
VIT_06s0004g06270.t01	Wine grape	peroxisome	64.27	60.86
Zm00001d034706_P001	Maize	cytosol, peroxisome, vacuole	60.0	57.99
Os03t0826300-00	Rice	cytosol, peroxisome, vacuole	59.2	57.36
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	59.73	56.71
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	58.93	55.95
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	58.67	55.7
Solyc06g076830.1.1	Tomato	plastid	63.73	53.59
CDY39936	Canola	cytosol, peroxisome, plasma membrane	44.8	51.06
CDX95295	Canola	cytosol, peroxisome, plasma membrane	45.07	50.75
KXG37228	Sorghum	plastid	60.0	49.56
HORVU5Hr1G114990.3	Barley	extracellular, mitochondrion, plasma membrane	57.33	49.54
CDY65829	Canola	cytosol, peroxisome, plastid	24.53	44.88

Protein Annotations

EnsemblPlants:CDY10265	EnsemblPlantsGene:GSBRNA2T00032093001	GO:A0A078F6W6	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PANTHER:PTHR44371:SF2	PFAM:PF03151	ProteinID:CDY10265	ProteinID:CDY10265.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EB1680	UniProt:A0A078F6W6	MapMan:24.2.1.1.4	:

Description

BnaC05g05080DBnaC05g05080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6W6]

Coordinates

chrLK032001:-:831924..834040

Molecular Weight (calculated)

41426.0 Da

IEP (calculated)

10.005

GRAVY (calculated)

0.412

Length

375 amino acids

Sequence
(BLAST)

001: MTAAELEAGV SREPDESEMN IFSDNGSQSV VSQLLDHINS HEKRGGGFSE RFLRWRRRYL PVGGDNRRDH GSLKHSGPLV SGAAYCISSC SMILMNKVVL
101: STYNFNAGIS LMLYQNLISC LVVALLKFSG VVSVEKFNWK LIRVWLPVNV IFVGMLISGM YSLKYINVAM VTILKNATNI ITAIGELYMF RKRQNNKVWA
201: AMFMMIISAI SGGITDLTFN AVGYTWQTAN CVLTASYSLT LRRVMDKAKQ STKSGSLNEV SMVLLNNLLS LPFGITLVIL LGEWRYVIST DVTKDAMFWV
301: VATASGFLGL AISFTSMWFL HQTGPTTYSL VGSLNKVPIS LSGLLLFNVP LSLPNFFSIL FGLFAGVVFA RAKMS

Best Arabidopsis Sequence Match ( AT1G07290.1 )
(BLAST)

001: MSAVKLEAIV CHEPDESELS HLSDNGSKTK NGVVFQLLDQ KSSEHRWFSE RFLRWRRRYL PVDGDNRRDH GSVKQSGPLV SGAAYCISSC SMIILNKIVL
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS

Arabidopsis Description

GONST2golgi nucleotide sugar transporter 2 [Source:TAIR;Acc:AT1G07290]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.