CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015571.1-P	Field mustard	nucleus, peroxisome, plasma membrane	100.0	100.0
CDY10265	Canola	nucleus, peroxisome, plasma membrane	96.03	96.8
CDY06248	Canola	peroxisome, plasma membrane, plastid	82.54	86.19
CDY09926	Canola	nucleus, peroxisome, plasma membrane	82.01	85.64
CDY05069	Canola	cytosol, endoplasmic reticulum, plasma membrane	20.11	72.38
KRG98331	Soybean	cytosol, peroxisome, plasma membrane	66.14	63.61
PGSC0003DMT400078032	Potato	cytosol, nucleus, peroxisome	64.02	62.53
VIT_06s0004g06270.t01	Wine grape	peroxisome	64.29	61.36
Os03t0826300-00	Rice	cytosol, peroxisome, vacuole	59.52	58.14
Zm00001d034706_P001	Maize	cytosol, peroxisome, vacuole	58.73	57.22
TraesCS5D01G502800.1	Wheat	cytosol, peroxisome, vacuole	59.79	57.22
TraesCS5B01G501700.1	Wheat	cytosol, peroxisome, vacuole	58.99	56.46
TraesCS5A01G487900.1	Wheat	cytosol, peroxisome, vacuole	58.73	56.2
Solyc06g076830.1.1	Tomato	plastid	64.02	54.26
CDY39936	Canola	cytosol, peroxisome, plasma membrane	44.44	51.06
CDX95295	Canola	cytosol, peroxisome, plasma membrane	44.71	50.75
HORVU5Hr1G114990.3	Barley	extracellular, mitochondrion, plasma membrane	57.41	50.0
KXG37228	Sorghum	plastid	59.79	49.78
CDY65829	Canola	cytosol, peroxisome, plastid	24.6	45.37

Protein Annotations

EnsemblPlants:CDY06695	EnsemblPlantsGene:GSBRNA2T00122872001	GO:A0A078EXC1	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44371	PANTHER:PTHR44371:SF2
PFAM:PF03151	ProteinID:CDY06695	ProteinID:CDY06695.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544D87
MapMan:24.2.1.1.4	:	:	:	:	:

Description

BnaA10g04740D

Coordinates

chrLK031972:-:333263..335360

Molecular Weight (calculated)

41695.4 Da

IEP (calculated)

10.092

GRAVY (calculated)

0.422

Length

378 amino acids

Sequence
(BLAST)

001: MTAAELEAGV SPEPDVSELN IFSDNGSQSV VSQLLDHIHS HEKSSQRRGG FSERFLRWRR RYLPVGGDNR RDHGSLKHSG PLVSGAAYCI SSCSMILMNK
101: VVLSTYNFNA GISLMLYQNL ISCLVVALLK FSGVVSVEKF NWKLIRVWLP VNVIFVGMLI SGMYSLKYIN VAMVTILKNA TNIITAIGEL YMFRKRQNNK
201: VWAAMFMMII SAISGGITDL TFNAVGYTWQ TANCVLTASY SLTLRRVMDK AKQSTKSGSL NEVSMVLLNN LLSLPFGITL IVLLGEWRYV ISTDVTKDAM
301: FWVVATASGF LGLAISFTSM WFLHQTGPTT YSLVGSLNKV PISLSGLVLF NVPLSLPNLF SILFGLFAGV VFARAKMS

Best Arabidopsis Sequence Match ( AT1G07290.1 )
(BLAST)

001: MSAVKLEAIV CHEPDESELS HLSDNGSKTK NGVVFQLLDQ KSSEHRWFSE RFLRWRRRYL PVDGDNRRDH GSVKQSGPLV SGAAYCISSC SMIILNKIVL
101: SSYNFNAGVS LMLYQNLISC LVVAVLDISG VVSVEKFNWK LIRVWMPVNV IFVGMLVSGM YRNRGGIHVP QKAEQQGLGC NVHDDHFCNQ RRYHGSHIRC
201: SRVTWQLANC FLTASYSLTL RRVMDKAKQS TKSGSLNEVS MVLLNNLLSI PFGIILIILL GEWRYVISTD VTKDSMFWVV ATASGFLGLA ISFTSMWFLH
301: QTGPTTYSLV GSLNKVPISL AGLVLFNVPL SLPNLFSILF GLFAGVVFAR AKMS

Arabidopsis Description

GONST2golgi nucleotide sugar transporter 2 [Source:TAIR;Acc:AT1G07290]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.