Factsheet for PGSC0003DMT400017112

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g075170.1.1	Tomato	mitochondrion	77.59	87.5
VIT_08s0058g01000.t01	Wine grape	mitochondrion	67.47	65.57
KRH76094	Soybean	mitochondrion	62.89	60.56
PGSC0003DMT400052597	Potato	mitochondrion	60.24	58.82
KRH65466	Soybean	mitochondrion	41.93	53.54
PGSC0003DMT400040385	Potato	cytosol	43.13	44.09
PGSC0003DMT400028106	Potato	plastid	42.17	38.63
PGSC0003DMT400076866	Potato	cytosol, plastid	40.0	35.93

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M1A8L1
PFAM:PF00155	EnsemblPlantsGene:PGSC0003DMG400006678	PGSC:PGSC0003DMG400006678	EnsemblPlants:PGSC0003DMT400017112	PRINTS:PR00799	PANTHER:PTHR11879
PANTHER:PTHR11879:SF14	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00029517F0

Description

Aspartate aminotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400006678]

Coordinates

chr10:+:48978066..48982521

Molecular Weight (calculated)

47001.8 Da

IEP (calculated)

6.825

GRAVY (calculated)

-0.322

Length

415 amino acids

Sequence
(BLAST)

001: MGWWDHVQPA PKDPITSVTQ AFLSDPTPLK LNLGVGAYRD DKGKPVTLEC VRRAAEKISG CEILESTKAT TKSKFVQDCV KLAYGNDSSV VREDRFAGVP
101: ALSGTGACRL FAEFQRRFYP DSQMFLPMPT WSNHHDIWRD SQVCTRTYHY YDPGTKGLRF QALVNDIKNA PDRSFFLLHP CAHNPTGVDP NYEQWKEISH
201: IFKIKNHFPF FDMAYQGIAS GDVERDATAI RIFLEDGHLL GCAQSFSKNM GLYEHRVGCV SIVSWDDKQA TAIKSQLQRI VRAMYSSSPV HGPLLVSTIL
301: NDADLKALWE EEVKVMVDRL ISMRITLRQT LEELNSSSSW EHITKQVGMF YFSGLSPEEV NHLQRDFHIY MTNDGRISMA GVTRSNVDYL ASAIHEVTSV
401: NNSNCIDSKH FEFVV

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.