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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 11
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:mitochondrion, plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 cytosol: 22313117
msms PMID: 22313117 doi
S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto
Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g041870.2.1 Tomato plastid 97.84 97.84
CDY13467 Canola plastid 80.74 82.16
Bra023969.1-P Field mustard plastid 80.52 82.12
AT4G31990.3 Thale cress plastid 82.03 82.03
CDX72339 Canola plastid 80.74 80.91
KXG31276 Sorghum plastid 78.14 78.65
GSMUA_Achr6P30270_001 Banana plastid 78.14 78.65
Os02t0797500-01 Rice plastid 77.27 77.95
KRH05255 Soybean plastid 77.92 77.75
KRH15792 Soybean plastid 77.71 77.54
TraesCS6D01G344200.1 Wheat plastid 75.32 76.32
TraesCS6B01G393600.1 Wheat golgi 75.11 76.26
Zm00001d018386_P005 Maize plastid 76.84 75.53
GSMUA_Achr5P16540_001 Banana cytosol, peroxisome, plastid 43.29 74.35
TraesCS6A01G360700.2 Wheat golgi, plastid, unclear 74.68 73.72
CDX68807 Canola plastid 81.39 73.29
VIT_04s0008g06040.t01 Wine grape cytosol, peroxisome, plastid 82.47 73.27
HORVU0Hr1G017370.1 Barley plastid 74.46 66.15
CDX72238 Canola mitochondrion 29.0 63.81
PGSC0003DMT400040385 Potato cytosol 46.75 53.2
PGSC0003DMT400028106 Potato plastid 49.13 50.11
PGSC0003DMT400052597 Potato mitochondrion 40.69 44.24
PGSC0003DMT400017112 Potato cytosol 35.93 40.0
Protein Annotations
KEGG:00220+2.6.1.1KEGG:00250+2.6.1.1KEGG:00270+2.6.1.1KEGG:00330+2.6.1.1KEGG:00350+2.6.1.1KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1KEGG:00401+2.6.1.1KEGG:00710+2.6.1.1KEGG:00950+2.6.1.1KEGG:00960+2.6.1.1MapMan:25.1.7
Gene3D:3.40.640.10Gene3D:3.90.1150.10ProteinID:ABB55364ProteinID:ABB55364.1InterPro:Aminotransferase_I/IIInterPro:Asp_trans
EMBL:DQ252487GO:GO:0003674GO:GO:0003824GO:GO:0004069GO:GO:0005488GO:GO:0005575
GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006520GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0008483GO:GO:0009058GO:GO:0009409GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009628GO:GO:0009941GO:GO:0009987GO:GO:0010319
GO:GO:0016740GO:GO:0030170GO:GO:0046686GO:GO:0048046GO:GO:0080130InterPro:IPR015421
InterPro:IPR015422UniProt:M1CXI6InterPro:NHTrfase_class1_PyrdxlP-BSPFAM:PF00155EnsemblPlantsGene:PGSC0003DMG400029897PGSC:PGSC0003DMG400029897
EnsemblPlants:PGSC0003DMT400076866PRINTS:PR00799ScanProsite:PS00105PANTHER:PTHR11879PANTHER:PTHR11879:SF1InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383UniParc:UPI0001D6AF46::
Description
Aspartate aminotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400029897]
Coordinates
chr8:+:20578864..20584698
Molecular Weight (calculated)
50842.0 Da
IEP (calculated)
8.867
GRAVY (calculated)
-0.219
Length
462 amino acids
Sequence
(BLAST)
001: MASTMFSLAS VTPSASISLQ DNLKPKLKLG TSSQRAFPRK DFMKAKSNGR TTMAVAVNVS RFEGITMAPP DPILGVSEAF KADTNELKLN LGVGAYRTED
101: LQPYVLNVVK KAENLILERG ENKEYLPIEG LAAFNKVTAE LLFGKDNPVL QQQRVATIQG LSGTGSLRIA AALIERYFPG SKILISSPTW GNHKNIFNDA
201: RVPWSEYRYY DPKTVGLDFA GMIEDIKAAP EGSFILLHGC AHNPTGIDPT PEQWEKIADV IQEKNHIPFF DVAYQGFASG SLDEDASSVR MFAARGMELL
301: VAQSYSKNLG LYGERIGAIN VLCSSADAAT RVKSQLKRLA RPMYSNPPIH GAKIVANVVG TPELFSEWKE EMEMMAGRIK SVRQKLYDSL SAKDKSGKDW
401: SFILKQIGMF SFTGLNKAQS ENMADKWHVY MTKDGRISLA GLSAAKCEYL ADAIIDSYYN VS
Best Arabidopsis Sequence Match ( AT4G31990.1 )
(BLAST)
001: MASLMLSLGS TSLLPREINK DKLKLGTSAS NPFLKAKSFS RVTMTVAVKP SRFEGITMAP PDPILGVSEA FKADTNGMKL NLGVGAYRTE ELQPYVLNVV
101: KKAENLMLER GDNKEYLPIE GLAAFNKATA ELLFGAGHPV IKEQRVATIQ GLSGTGSLRL AAALIERYFP GAKVVISSPT WGNHKNIFND AKVPWSEYRY
201: YDPKTIGLDF EGMIADIKEA PEGSFILLHG CAHNPTGIDP TPEQWVKIAD VIQEKNHIPF FDVAYQGFAS GSLDEDAASV RLFAERGMEF FVAQSYSKNL
301: GLYAERIGAI NVVCSSADAA TRVKSQLKRI ARPMYSNPPV HGARIVANVV GDVTMFSEWK AEMEMMAGRI KTVRQELYDS LVSKDKSGKD WSFILKQIGM
401: FSFTGLNKAQ SDNMTDKWHV YMTKDGRISL AGLSLAKCEY LADAIIDSYH NVS
Arabidopsis Description
ASP5Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:B9DG21]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.