Factsheet for VIT_04s0008g06040.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076866	Potato	cytosol, plastid	73.27	82.47
Bra023969.1-P	Field mustard	plastid	71.15	81.68
CDY13467	Canola	plastid	71.15	81.5
Solyc08g041870.2.1	Tomato	plastid	72.12	81.17
AT4G31990.3	Thale cress	plastid	71.73	80.74
GSMUA_Achr6P30270_001	Banana	plastid	70.96	80.39
CDX72339	Canola	plastid	70.96	80.04
KRH15792	Soybean	plastid	71.15	79.91
KRH05255	Soybean	plastid	70.96	79.7
Os02t0797500-01	Rice	plastid	69.23	78.6
KXG31276	Sorghum	plastid	68.65	77.78
TraesCS6D01G344200.1	Wheat	plastid	67.88	77.41
GSMUA_Achr5P16540_001	Banana	cytosol, peroxisome, plastid	40.0	77.32
Zm00001d018386_P005	Maize	plastid	69.81	77.23
TraesCS6B01G393600.1	Wheat	golgi	67.5	77.14
TraesCS6A01G360700.2	Wheat	golgi, plastid, unclear	67.88	75.43
CDX68807	Canola	plastid	72.12	73.1
HORVU0Hr1G017370.1	Barley	plastid	67.69	67.69
CDX72238	Canola	mitochondrion	25.96	64.29
VIT_11s0016g03720.t01	Wine grape	cytosol	44.42	56.2
VIT_04s0008g03770.t01	Wine grape	cytosol	44.04	54.27
VIT_12s0028g01820.t01	Wine grape	mitochondrion	35.58	43.74
VIT_08s0058g01000.t01	Wine grape	mitochondrion	34.04	41.45
VIT_05s0020g03410.t01	Wine grape	cytosol	7.69	18.43

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	EntrezGene:100242364
wikigene:100242364	MapMan:25.1.7	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EMBL:AM441038	InterPro:Aminotransferase_I/II
InterPro:Asp_trans	ProteinID:CAN76227	ProteinID:CAN76227.1	ProteinID:CCB46838	ProteinID:CCB46838.1	ncoils:Coil
UniProt:F6H3U9	EMBL:FN595231	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006520
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009409
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987
GO:GO:0010319	GO:GO:0016740	GO:GO:0030170	GO:GO:0046686	GO:GO:0048046	GO:GO:0080130
InterPro:IPR015421	InterPro:IPR015422	EntrezGene:LOC100242364	wikigene:LOC100242364	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155
PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF1	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGR:TC55559	UniParc:UPI0002109233	ArrayExpress:VIT_04s0008g06040	EnsemblPlantsGene:VIT_04s0008g06040
EnsemblPlants:VIT_04s0008g06040.t01	RefSeq:XP_002285385	RefSeq:XP_002285385.1	:	:	:

Description

Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F6H3U9]

Coordinates

chr4:+:5725900..5739416

Molecular Weight (calculated)

57414.3 Da

IEP (calculated)

8.140

GRAVY (calculated)

-0.123

Length

520 amino acids

Sequence
(BLAST)

001: MYSASAIDKA TEFCFLLCHE TSYNYKYSIR VPVTESNPHH CDPIIPLLLA MTIIPSKMMA STMLSLVSAA LPLQENHKGK MNLGSSDCSS FLRKEKRNPF
101: MKTKSFGRIN MAIAVNTSRF EGVTMAPPDP ILGVSEAFRA DNSEMKLNLG VGAYRTEELQ PYVLNVVKKA ENLMLERGEN KEYLPIEGLA AFNKVTAELL
201: FGAGNPVIEQ QRVATVQGLS GTGSLRLAAA LIERYFPGAK VLISSPTWGN HKNIFNDARV PWSEYRYYDP KTVGLDFDGM ISDIKAAPEG SFVLLHGCAH
301: NPTGIDPTPE QWEKIADVIQ EKNHIPFFDV AYQGFASGSL DADASSVRLF AARGMELLVA QSYSKNLGLY AERIGAINVV CSSADAAARV KSQLKRIARP
401: MYSNPPIHGA RIVANVVGDP ALFNEWKEEM ELMAGRIKNV RQKLFDSLSA KDKCGKDWSF ILKQIGMFSF TGLSKVQSEN MTNKWHVYMT KDGRISLAGL
501: SLAKCEYLAD AIIDSFHCVS

Best Arabidopsis Sequence Match ( AT4G31990.1 )
(BLAST)

001: MASLMLSLGS TSLLPREINK DKLKLGTSAS NPFLKAKSFS RVTMTVAVKP SRFEGITMAP PDPILGVSEA FKADTNGMKL NLGVGAYRTE ELQPYVLNVV
101: KKAENLMLER GDNKEYLPIE GLAAFNKATA ELLFGAGHPV IKEQRVATIQ GLSGTGSLRL AAALIERYFP GAKVVISSPT WGNHKNIFND AKVPWSEYRY
201: YDPKTIGLDF EGMIADIKEA PEGSFILLHG CAHNPTGIDP TPEQWVKIAD VIQEKNHIPF FDVAYQGFAS GSLDEDAASV RLFAERGMEF FVAQSYSKNL
301: GLYAERIGAI NVVCSSADAA TRVKSQLKRI ARPMYSNPPV HGARIVANVV GDVTMFSEWK AEMEMMAGRI KTVRQELYDS LVSKDKSGKD WSFILKQIGM
401: FSFTGLNKAQ SDNMTDKWHV YMTKDGRISL AGLSLAKCEY LADAIIDSYH NVS

Arabidopsis Description

ASP5Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:B9DG21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.