Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g03720.t01 | Wine grape | cytosol | 28.11 | 14.84 |
| VIT_04s0008g03770.t01 | Wine grape | cytosol | 24.88 | 12.8 |
| VIT_12s0028g01820.t01 | Wine grape | mitochondrion | 15.67 | 8.04 |
| VIT_04s0008g06040.t01 | Wine grape | cytosol, peroxisome, plastid | 18.43 | 7.69 |
| VIT_08s0058g01000.t01 | Wine grape | mitochondrion | 14.75 | 7.49 |
| HORVU7Hr1G010790.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00220+2.6.1.1 | KEGG:00250+2.6.1.1 | KEGG:00270+2.6.1.1 | KEGG:00330+2.6.1.1 | KEGG:00350+2.6.1.1 | KEGG:00360+2.6.1.1 |
| KEGG:00400+2.6.1.1 | KEGG:00401+2.6.1.1 | KEGG:00710+2.6.1.1 | KEGG:00950+2.6.1.1 | KEGG:00960+2.6.1.1 | Gene3D:3.40.640.10 |
| MapMan:35.1 | InterPro:Aminotransferase_I/II | InterPro:Asp_trans | ProteinID:CCB50420 | ProteinID:CCB50420.1 | UniProt:F6HDP9 |
| EMBL:FN595749 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004069 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006520 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008483 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030170 |
| InterPro:IPR015421 | PFAM:PF00155 | PANTHER:PTHR11879 | PANTHER:PTHR11879:SF22 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major |
| SUPFAM:SSF53383 | UniParc:UPI000210A12E | ArrayExpress:VIT_05s0020g03410 | EnsemblPlantsGene:VIT_05s0020g03410 | EnsemblPlants:VIT_05s0020g03410.t01 | : |
Description
No Description!
Coordinates
chr5:-:5175156..5176331
Molecular Weight (calculated)
23799.8 Da
IEP (calculated)
9.450
GRAVY (calculated)
-0.056
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDKIAPITL ITLYEMMVDL TRRVERIELI LSEHPSSSRG ALGVAMPSLP HLTPSMFATL GASHPRPRPH SVFQQHSSSI SLATPTRPPP CHLSTDPKPY
101: LSTLHAFIPI STITILSLHH HAPCHSSSTH HIHAPFFITL KGLHRTHPPI ATPAIQEKGA ATVQGSSGIG SLRIGVEFLA KHYYQCTICI PVPTWGNHSN
201: IFTITGSSVK TYRYYDP
101: LSTLHAFIPI STITILSLHH HAPCHSSSTH HIHAPFFITL KGLHRTHPPI ATPAIQEKGA ATVQGSSGIG SLRIGVEFLA KHYYQCTICI PVPTWGNHSN
201: IFTITGSSVK TYRYYDP
001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV
Arabidopsis Description
ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.